RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 ZNF154Q13106 437 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 TRA2AQ13595 282 aaKnown RBP eCLIP10.67□□□□□ -0.7
PHGDH-201ENST00000369407 FAM189A2Q15884 450 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 SPIN3Q5JUX0 258 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 Q6ZS52 159 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 LGI3Q8N145 548 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 TVP23CQ96ET8 276 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 TM2D1Q9BX74 207 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 VPS13AQ96RL7 3174 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 IGKV1-27A0A075B6S5 117 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 PROB1E7EW31 1015 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 DHRS3O75911 302 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 IL13RA2Q14627 380 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 RSPO1Q2MKA7 263 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-201ENST00000369407 FAM210BQ96KR6 192 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 DDA1Q9BW61 102 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 RBM24Q9BX46 236 aaKnown RBP10.67□□□□□ -0.7
PHGDH-201ENST00000369407 CALHM2Q9HA72 323 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 PPP1R14DQ9NXH3 145 aa10.67□□□□□ -0.7
PHGDH-201ENST00000369407 FER1L5A0AVI2 2057 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 TMEM50AO95807 157 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 CD200P41217 278 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 RPL29P47914 159 aaKnown RBP10.66□□□□□ -0.7
PHGDH-201ENST00000369407 FGF8P55075 233 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-201ENST00000369407 MPV17LQ2QL34 196 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 MAJINQ3KP22 176 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 OR10G3Q8NGC4 313 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 ZNF837Q96EG3 531 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-201ENST00000369407 TP53TG5Q9Y2B4 290 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 RRP8O43159 456 aaKnown RBP10.66□□□□□ -0.7
PHGDH-201ENST00000369407 HLA-HP01893 362 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 PATE4P0C8F1 98 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 NKX2-1P43699 371 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-201ENST00000369407 GLIPR1P48060 266 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 PRAMEF20Q5VT98 475 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 Q6ZPA2 131 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 NECAP1Q8NC96 275 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 NKX2-4Q9H2Z4 354 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 FBRSQ9HAH7 460 aa10.66□□□□□ -0.7
PHGDH-201ENST00000369407 ADAM20O43506 726 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 SPINK2P20155 84 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 IL2RGP31785 369 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 DLX2Q07687 328 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-201ENST00000369407 ANKRD39Q53RE8 183 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 KIAA0895LQ68EN5 471 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 FBXO46Q6PJ61 603 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-201ENST00000369407 D2HGDHQ8N465 521 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 TMEM252Q8N6L7 170 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 OR4D5Q8NGN0 318 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 MVB12AQ96EY5 273 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 PLEK2Q9NYT0 353 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 TRBV11-1A0A0K0K1C0 115 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 CD55P08174 381 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 BLKP51451 505 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 VAMP2P63027 116 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 WDR25Q64LD2 544 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-201ENST00000369407 NCR3LG1Q68D85 454 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 SLC16A14Q7RTX9 510 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 CMTM1Q8IZ96 169 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 ZNF664Q8N3J9 261 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 PLPP5Q8NEB5 264 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 WFIKKN1Q96NZ8 548 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 HIST1H2BLQ99880 126 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 TMEM106CQ9BVX2 250 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 METTL7AQ9H8H3 244 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 P4HTMQ9NXG6 502 aa10.65□□□□□ -0.7
PHGDH-201ENST00000369407 UBE2J1Q9Y385 318 aaPredicted RBP10.65□□□□□ -0.7
PHGDH-201ENST00000369407 EPOPA6NHQ4 379 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 TCF21O43680 179 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 ECI1P42126 302 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 FASLGP48023 281 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 RAB4BP61018 213 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 HERV-K104P61576 105 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 GRB2P62993 217 aaKnown RBP10.65□□□□□ -0.71
PHGDH-201ENST00000369407 IZUMO4Q1ZYL8 232 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 PLPPR5Q32ZL2 321 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 LCN15Q6UWW0 184 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 SLC25A31Q9H0C2 315 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 DECR2Q9NUI1 292 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 KIAA1456Q9P272 454 aa10.65□□□□□ -0.71
PHGDH-201ENST00000369407 A0A1W2PNV4 684 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 M0R135 149 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 HSPB6O14558 160 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 PTBP3O95758 552 aaKnown RBP10.64□□□□□ -0.71
PHGDH-201ENST00000369407 TUBG1P23258 451 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 GUCA1AP43080 201 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-201ENST00000369407 HLA-DRB3P79483 266 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 CFHR1Q03591 330 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF266Q14584 549 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF705AQ6ZN79 300 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-201ENST00000369407 ODF3L1Q8IXM7 274 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 C7orf61Q8IZ16 206 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 MAML2Q8IZL2 1156 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-201ENST00000369407 CLDND2Q8NHS1 167 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF799Q96GE5 643 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 ZNF385AQ96PM9 386 aaKnown RBP10.64□□□□□ -0.71
PHGDH-201ENST00000369407 CD207Q9UJ71 328 aa10.64□□□□□ -0.71
PHGDH-201ENST00000369407 IGKV1-12A0A0C4DH73 117 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms