RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 NMES1Q9C002 83 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 PRDM14Q9GZV8 571 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 NECAP2Q9NVZ3 263 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 TIMM23O14925 209 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 MT-ND6P03923 174 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 CHRM2P08172 466 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 TGFBR1P36897 503 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 IER3P46695 156 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SNAI3Q3KNW1 292 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 ANKRD55Q3KP44 614 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 ERGIC1Q969X5 290 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 FAM3DQ96BQ1 224 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 TEAD3Q99594 435 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 TXNIPQ9H3M7 391 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 IKZF5Q9H5V7 419 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 SEBOXQ9HB31 216 aaPredicted RBP7.69□□□□□ -1.18
SYNE1-206ENST00000367253 UQCR10Q9UDW1 63 aa7.69□□□□□ -1.18
SYNE1-206ENST00000367253 C7orf71A4D174 169 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 SNRPGP15A8MWD9 76 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 S1PR2O95136 353 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 SP1P08047 785 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 ST6GAL1P15907 406 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 BTF3P20290 206 aaKnown RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 KIR2DL1P43626 348 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 KIR2DL2P43627 348 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 FAM166AQ6J272 317 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 LINC01465Q8N7H1 131 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 NKAIN3Q8N8D7 197 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 OR10G3Q8NGC4 313 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF480Q8WV37 535 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 NPFFR1Q9GZQ6 430 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 NSG2Q9Y328 171 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 SPTBP11277 2137 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 HMGN2P05204 90 aaKnown RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 PIPP12273 146 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 GPM6AP51674 278 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 GP2P55259 537 aaKnown RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 SCGB1D4Q6XE38 83 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 C16orf47Q6ZP98 133 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM144Q7Z5S9 345 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 BPIFA4PQ86YQ2 179 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 RNF113BQ8IZP6 322 aaKnown RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 CACNA1BQ00975 2339 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 OR2A25A4D2G3 310 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 FAM74A7A6NL05 159 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 EFSO43281 561 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 F13BP05160 661 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 SFTA3P0C7M3 94 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 FAM106CPP0CH98 169 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 SDC1P18827 310 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 COX5AP20674 150 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 GPX4P36969 197 aaPredicted RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 MGAT2Q10469 447 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 GAGE2BQ13066 116 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 FAM74A3Q4VXF1 159 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 PHLDA2Q53GA4 152 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 FBLN7Q53RD9 439 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 WDFY1Q8IWB7 410 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 SLC25A28Q96A46 364 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 RAX2Q96IS3 184 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 PEBP4Q96S96 227 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 ATP6V0BQ99437 205 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 RARRES2Q99969 163 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 PCGF1Q9BSM1 259 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 C20orf27Q9GZN8 174 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 NTMQ9P121 344 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 PEF1Q9UBV8 284 aaKnown RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 UFC1Q9Y3C8 167 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 TRIOBPQ9H2D6 2365 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 TRAV27A0A087WT01 109 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 TMEM202A6NGA9 273 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 BCL2L11O43521 198 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 PRKRAO75569 313 aaKnown RBP7.68□□□□□ -1.18
SYNE1-206ENST00000367253 NRASP01111 189 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 OR5AL1P0C617 328 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF626Q68DY1 528 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 GPX8Q8TED1 209 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 SLC25A46Q96AG3 418 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 PILRBQ9UKJ0 227 aa7.68□□□□□ -1.18
SYNE1-206ENST00000367253 CD5P06127 495 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 ANKRD34CP0C6C1 535 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 AREGP15514 252 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 GFRA1P56159 465 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 FZD2Q14332 565 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 DPY19L2P2Q6ZN68 376 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 ARRDC2Q8TBH0 407 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 MISP3Q96FF7 219 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 SORT1Q99523 831 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 SPSB2Q99619 263 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 MRPL37Q9BZE1 423 aaKnown RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 NPDC1Q9NQX5 325 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 ZNF133P52736 654 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 CMC4P56277 68 aaPredicted RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 CLDN20P56880 219 aa7.67□□□□□ -1.18
SYNE1-206ENST00000367253 SNRPGP62308 76 aaKnown RBP7.67□□□□□ -1.18
SYNE1-206ENST00000367253 EMC4Q5J8M3 183 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms