RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 HCAR1Q9BXC0 346 aa5.4□□□□□ -1.55
H3F3A-201ENST00000366813 DPH5Q9H2P9 285 aa5.4□□□□□ -1.55
H3F3A-201ENST00000366813 GLS2Q9UI32 602 aa5.4□□□□□ -1.55
H3F3A-201ENST00000366813 KCNK7Q9Y2U2 307 aa5.4□□□□□ -1.55
H3F3A-201ENST00000366813 PYGO1Q9Y3Y4 419 aa5.4□□□□□ -1.55
H3F3A-201ENST00000366813 C12orf71A8MTZ7 269 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 AZIN1O14977 448 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 SGCEO43556 437 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 MT-ATP6P00846 226 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 PGA5P0DJD9 388 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 BGNP21810 368 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 ERVK11-1P61568 191 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 TNFAIP8L3Q5GJ75 292 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 ULK3Q6PHR2 472 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 MSANTD1Q6ZTZ1 278 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 C11orf53Q8IXP5 236 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 TLCD1Q96CP7 247 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 AKR1E2Q96JD6 320 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 GAFA1Q96PS6 74 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 ADAT1Q9BUB4 502 aaKnown RBP5.39□□□□□ -1.55
H3F3A-201ENST00000366813 TMEM109Q9BVC6 243 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 C19orf12Q9NSK7 152 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.39□□□□□ -1.55
H3F3A-201ENST00000366813 AURKCQ9UQB9 309 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 TBL2Q9Y4P3 447 aaKnown RBP5.39□□□□□ -1.55
H3F3A-201ENST00000366813 DNAJC15Q9Y5T4 150 aa5.39□□□□□ -1.55
H3F3A-201ENST00000366813 DNAH6Q9C0G6 4158 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 A0A087X002 238 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 GMNCA6NCL1 334 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 C12orf77C9JDV5 145 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 F8VVB4 439 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 F8VWA3 439 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 BCHEP06276 602 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 CCL3L1P16619 93 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 MSR1P21757 451 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 FASP25445 335 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 SERPINB5P36952 375 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 SLC25A1P53007 311 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 UGT2B15P54855 530 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 OR12D2P58182 307 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 GK2Q14410 553 aaPredicted RBP5.38□□□□□ -1.55
H3F3A-201ENST00000366813 OPCMLQ14982 345 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 ZNF74Q16587 644 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 KRT71Q3SY84 523 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 ADAMTSL4-AS1Q5T5F5 129 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 STUMQ69YW2 141 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 BTNL8Q6UX41 500 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 LYPD6Q86Y78 171 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 OR11H1Q8NG94 326 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 MRGPRDQ8TDS7 321 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 CHPT1Q8WUD6 406 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 SPRYD4Q8WW59 207 aaPredicted RBP5.38□□□□□ -1.55
H3F3A-201ENST00000366813 APOBEC3DQ96AK3 386 aaPredicted RBP5.38□□□□□ -1.55
H3F3A-201ENST00000366813 SLCO4A1Q96BD0 722 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 WDR13Q9H1Z4 485 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 RIMS4Q9H426 269 aaPredicted RBP5.38□□□□□ -1.55
H3F3A-201ENST00000366813 ARMC7Q9H6L4 198 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 ANGPT4Q9Y264 503 aa5.38□□□□□ -1.55
H3F3A-201ENST00000366813 APOBP04114 4563 aaKnown RBP5.37□□□□□ -1.55
H3F3A-201ENST00000366813 A0A1W2PRG6 482 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 ODF3BA8MYP8 253 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 SNURFLB1AK76 121 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 CENPBD1B2RD01 187 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 CCRL2O00421 344 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 IMPA2O14732 288 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 SELENOFO60613 162 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 FMO6PO60774 539 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 SLC2A2P11168 524 aaPredicted RBP5.37□□□□□ -1.55
H3F3A-201ENST00000366813 GUCA1AP43080 201 aaPredicted RBP5.37□□□□□ -1.55
H3F3A-201ENST00000366813 MNAT1P51948 309 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 CAV3P56539 151 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 CSNK2BP67870 215 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 EWSR1Q01844 656 aaKnown RBP eCLIP5.37□□□□□ -1.55
H3F3A-201ENST00000366813 SCRN3Q0VDG4 424 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 CALCOCO2Q13137 446 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 DYNC1I2Q13409 638 aaKnown RBP5.37□□□□□ -1.55
H3F3A-201ENST00000366813 OR1Q1Q15612 314 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 CFAP157Q5JU67 520 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 FAM71E2Q8N5Q1 922 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 FNDC5Q8NAU1 212 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 SLC37A3Q8NCC5 494 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 OR10G8Q8NGN5 311 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 OR1F12Q8NHA8 337 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 OR5K1Q8NHB7 308 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 SLC26A7Q8TE54 656 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 DCUN1D4Q92564 292 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 PPP3R2Q96LZ3 170 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 RBM14Q96PK6 669 aaKnown RBP5.37□□□□□ -1.55
H3F3A-201ENST00000366813 WFDC6Q9BQY6 131 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 TMEM43Q9BTV4 400 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 TMED9Q9BVK6 235 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 BARHL1Q9BZE3 327 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 TUBA4BQ9H853 241 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 POLE4Q9NR33 117 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 P2RX2Q9UBL9 471 aa5.37□□□□□ -1.55
H3F3A-201ENST00000366813 KLK5Q9Y337 293 aaPredicted RBP5.37□□□□□ -1.55
H3F3A-201ENST00000366813 A0A0B4J2E0 115 aa5.36□□□□□ -1.55
H3F3A-201ENST00000366813 A0A1B0GX12 115 aa5.36□□□□□ -1.55
H3F3A-201ENST00000366813 OR6C6A6NF89 314 aa5.36□□□□□ -1.55
H3F3A-201ENST00000366813 SERPINE3A8MV23 424 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms