RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 FKBP2P26885 142 aaKnown RBP12.18□□□□□ -0.46
COL6A1-201ENST00000361866 CHRNA7P36544 502 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 CCL7P80098 99 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 OR10P1Q8NGE3 313 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 APH1AQ96BI3 265 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 CCL28Q9NRJ3 127 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 SHANK1Q9Y566 2161 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 EDDM3BP56851 147 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 PLAC9Q5JTB6 97 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 ZDHHC23Q8IYP9 409 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF519Q8TB69 540 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 ADAMTS17Q8TE56 1095 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 CCDC74BQ96LY2 380 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 KCNK17Q96T54 332 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 LHFPL6Q9Y693 200 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 DOCK8Q8NF50 2099 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 KIAA2026Q5HYC2 2103 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 TSPAN2O60636 221 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 SEC11BP0C7V7 166 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 GCH1P30793 250 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 LINC00114Q6XXX2 140 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF600Q6ZNG1 722 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 FSCN3Q9NQT6 498 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 SLC7A10Q9NS82 523 aa12.18□□□□□ -0.46
COL6A1-201ENST00000361866 PLXND1Q9Y4D7 1925 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 MAP1LC3B2A6NCE7 125 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 RNF212BA8MTL3 300 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 H0YIZ8 118 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 P2RY1P47900 373 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 MAP1LC3BQ9GZQ8 125 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 FAM206AQ9NX38 181 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 SCN5AQ14524 2016 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 IGHV1OR15-9A0A0B4J2B8 117 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 TRGC2P03986 189 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 FBP1P09467 338 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 CXorf67Q86X51 503 aaPredicted RBP12.17□□□□□ -0.46
COL6A1-201ENST00000361866 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 ADIPOR1Q96A54 375 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 NTNG2Q96CW9 530 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 AQP10Q96PS8 301 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 TCF20Q9UGU0 1960 aaKnown RBP12.17□□□□□ -0.46
COL6A1-201ENST00000361866 MT-CO2P00403 227 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF708P17019 499 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 EXT1Q16394 746 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 TMEM18Q96B42 140 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 RHOVQ96L33 236 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 GPR61Q9BZJ8 451 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 RPH3ALQ9UNE2 315 aa12.17□□□□□ -0.46
COL6A1-201ENST00000361866 SPTAN1Q13813 2472 aaKnown RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 SEC14L6B5MCN3 397 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 C17orf112F2Z3M2 114 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 CBR3O75828 277 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 PGA3P0DJD8 388 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 ENDOGQ14249 297 aaKnown RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 NSUN5P2Q63ZY6 315 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 DHRS7BQ6IAN0 325 aaPredicted RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 FAM103A1Q9BTL3 118 aaKnown RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 SLC2A8Q9NY64 477 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 ISG15P05161 165 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 MGST1P10620 155 aaKnown RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 TRIM61Q5EBN2 209 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 CXorf66Q5JRM2 361 aaPredicted RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 OR52M1Q8NGK5 317 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 OR1K1Q8NGR3 316 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 OR4A16Q8NH70 328 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 UCK1Q9HA47 277 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 TCAPO15273 167 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 SPINK4O60575 86 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 DEDDO75618 318 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 ABCA1O95477 2261 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 EFEMP2O95967 443 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 RPL29P47914 159 aaKnown RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 RAB35Q15286 201 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF343Q6P1L6 599 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 THOC3Q96J01 351 aaKnown RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 CHST5Q9GZS9 411 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 GPR27Q9NS67 375 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 XKRY2A2RUG3 117 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 SELENOVP59797 346 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 ZNF90Q03938 601 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 PMS2P11Q13670 270 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 LRRC75AQ8NAA5 344 aa12.16□□□□□ -0.46
COL6A1-201ENST00000361866 UTP23Q9BRU9 249 aaKnown RBP12.16□□□□□ -0.46
COL6A1-201ENST00000361866 FANCMQ8IYD8 2048 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 A0A1W2PNV4 684 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 A6NCN8 305 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 ARGFXA6NJG6 315 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 RAMP1O60894 148 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 FAM3AP98173 230 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 PRAMEF5Q5TYX0 476 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 PRAMEF6Q5VXH4 476 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 FDX2Q6P4F2 183 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 PACRGQ96M98 296 aaPredicted RBP12.15□□□□□ -0.46
COL6A1-201ENST00000361866 TXN2Q99757 166 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 WNT16Q9UBV4 365 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 TMEM14DPA8MWL7 114 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 IGHV3-13P01766 116 aa12.15□□□□□ -0.46
COL6A1-201ENST00000361866 IGHV3-7P01780 117 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms