RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 FAM106CPP0CH98 169 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 ATF1P18846 271 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 PRKACBP22694 351 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 LMO1P25800 156 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 SCN1BQ07699 218 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 DCTN2Q13561 401 aaKnown RBP16.71■□□□□ 0.27
CD47-202ENST00000361309 LHFPL2Q6ZUX7 228 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 OR2W3Q7Z3T1 314 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 NOL4LQ96MY1 436 aaPredicted RBP16.71■□□□□ 0.27
CD47-202ENST00000361309 A0A087X0M5 115 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 A0A1B0GX30 115 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A18PA6NE21 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A16PA6NEW6 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A20PA6NIJ5 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A9PA6NNJ1 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A12PA8MX19 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A5PA8MXJ8 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 NUDT19A8MXV4 375 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A15PP0C7V4 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A13PP0C7W8 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A14PP0C7W9 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 FAM90A24PP0C7X0 464 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 ZNF44P15621 663 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 NFYBP25208 207 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 KRBOX4Q5JUW0 171 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 UNQ9370/PRO34162Q6UXP9 181 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 CHPT1Q8WUD6 406 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 UTP4Q969X6 686 aaKnown RBP16.7■□□□□ 0.26
CD47-202ENST00000361309 FGGYQ96C11 551 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 COQ2Q96H96 371 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 COMMD4Q9H0A8 199 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 GNG8Q9UK08 70 aa16.7■□□□□ 0.26
CD47-202ENST00000361309 ZNF729A6NN14 1252 aaPredicted RBP16.69■□□□□ 0.26
CD47-202ENST00000361309 SNRNP70P08621 437 aaKnown RBP16.69■□□□□ 0.26
CD47-202ENST00000361309 HTR1FP30939 366 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 MYCNOSP40205 109 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 C17orf58Q2M2W7 97 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 UTS2BQ765I0 119 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 THNSL2Q86YJ6 484 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 KLHL30-AS1Q8NEE0 82 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 TOMM40LQ969M1 308 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 RNF166Q96A37 237 aaPredicted RBP16.69■□□□□ 0.26
CD47-202ENST00000361309 RPEQ96AT9 228 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 OPALINQ96PE5 141 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 SPACA5Q96QH8 159 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 P2RX4Q99571 388 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 LINC00527Q9UJ94 153 aa16.69■□□□□ 0.26
CD47-202ENST00000361309 KDM4BO94953 1096 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 CSN2P05814 226 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 ZNF20P17024 532 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 ISL1P61371 349 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 DGCR2P98153 550 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 ATXN7L3Q14CW9 347 aaPredicted RBP16.68■□□□□ 0.26
CD47-202ENST00000361309 TP53I3Q53FA7 332 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 TMEM244Q5VVB8 128 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 Q6P435 159 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 C5orf56Q8N8D9 126 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 CCDC197Q8NCU1 140 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 OR5D18Q8NGL1 313 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 OR56B4Q8NH76 319 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 OR9G1Q8NH87 305 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 TFAP2CQ92754 450 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 SPSB1Q96BD6 273 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 KIRREL1Q96J84 757 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 PPIL3Q9H2H8 161 aaKnown RBP16.68■□□□□ 0.26
CD47-202ENST00000361309 PCDHB16Q9NRJ7 776 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 ZFP57Q9NU63 452 aa16.68■□□□□ 0.26
CD47-202ENST00000361309 STAB2Q8WWQ8 2551 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 SERPINE3A8MV23 424 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 H0YHG0 523 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 SLC33A1O00400 549 aaPredicted RBP16.67■□□□□ 0.26
CD47-202ENST00000361309 IGHV3-7P01780 117 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 OCM2P0CE71 109 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 OCMP0CE72 109 aaPredicted RBP16.67■□□□□ 0.26
CD47-202ENST00000361309 SLC6A1P30531 599 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 ATP6V1E1P36543 226 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 ZNF85Q03923 595 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 HES1Q14469 280 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 KDM4DQ6B0I6 523 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 FAM220AQ7Z4H9 259 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 OR2G2Q8NGZ5 317 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 DUX3Q96PT4 197 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 ZMAT5Q9UDW3 170 aaKnown RBP16.67■□□□□ 0.26
CD47-202ENST00000361309 POMPQ9Y244 141 aa16.67■□□□□ 0.26
CD47-202ENST00000361309 AMMECR1Q9Y4X0 333 aaPredicted RBP16.67■□□□□ 0.26
CD47-202ENST00000361309 KBTBD11-OT1A0A1B0GTJ5 212 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 NHLRC4P0CG21 123 aaPredicted RBP16.66■□□□□ 0.26
CD47-202ENST00000361309 TMEM11P17152 192 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 HNF4GQ14541 408 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 DRAM1Q8N682 238 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 CHST4Q8NCG5 386 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 LEAP2Q969E1 77 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 NEK6Q9HC98 313 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 OR6C3Q9NZP0 311 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 U3KQK5 164 aa16.66■□□□□ 0.26
CD47-202ENST00000361309 A0A1W2PPI3 338 aa16.65■□□□□ 0.26
CD47-202ENST00000361309 G3V2T6 193 aa16.65■□□□□ 0.26
CD47-202ENST00000361309 J3QR06 171 aa16.65■□□□□ 0.26
CD47-202ENST00000361309 DEGS1O15121 323 aa16.65■□□□□ 0.26
CD47-202ENST00000361309 CGB3P0DN86 165 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms