RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 FBXL17Q9UF56 701 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ZDBF2Q9HCK1 2354 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 IGKV1-27A0A075B6S5 117 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 PMS2P1A4D2B8 440 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 LRRC3CA6NJW4 275 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ZNHIT1O43257 154 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 CLDN15P56746 228 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 CARD18P57730 90 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF273Q14593 569 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 TMEM42Q69YG0 159 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 ACSM6Q6P461 480 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 YRDCQ86U90 279 aaKnown RBP6.29□□□□□ -1.4
CLCN3-202ENST00000360642 POC1AQ8NBT0 407 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 BHLHE23Q8NDY6 225 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 OR1F12Q8NHA8 337 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 REEP6Q96HR9 211 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 C2orf50Q96LR7 162 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 S100A13Q99584 98 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 GPR173Q9NS66 373 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 TAS2R3Q9NYW6 316 aa6.29□□□□□ -1.4
CLCN3-202ENST00000360642 MRPS18CQ9Y3D5 142 aaKnown RBP6.29□□□□□ -1.4
CLCN3-202ENST00000360642 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 FAM181BA6NEQ2 426 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 RFPL3SP0C7P2 107 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 CD79AP11912 226 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 MTCP1P56278 107 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 STK11Q15831 433 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF674Q2M3X9 581 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 CHRFAM7AQ494W8 412 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 ZNF774Q6NX45 483 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 ATRAIDQ6UW56 229 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 UQCC3Q6UW78 93 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 OR2AE1Q8NHA4 323 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 FER1L6-AS2Q96M78 137 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 AQP10Q96PS8 301 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 PIGMQ9H3S5 423 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 PLEKHJ1Q9NW61 149 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 OR5AC2Q9NZP5 309 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 NCKAP5O14513 1909 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 ZFHX4Q86UP3 3567 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 PCSK5Q92824 1860 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 RAB19A4D1S5 217 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 MSGN1A6NI15 193 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 TSPAN9O75954 239 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 P04436 131 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 ICAM2P13598 275 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 TPT1P13693 172 aaKnown RBP6.28□□□□□ -1.4
CLCN3-202ENST00000360642 ELP2Q6IA86 826 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 PLXDC2Q6UX71 529 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 BAP18Q8IXM2 172 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 BPIFCQ8NFQ6 507 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 MARC2Q969Z3 335 aa6.28□□□□□ -1.4
CLCN3-202ENST00000360642 TRGV11A0A075B6L2 103 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 PRYO14603 147 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 SERPINA5P05154 406 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 FAM157CP0CG43 387 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF32P17041 273 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 GABRR1P24046 479 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 PTGER4P35408 488 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 BPIFB3P59826 476 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 RPS18P62269 152 aaKnown RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 PSG4Q00888 419 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 SCRN3Q0VDG4 424 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 RIPPLY2Q5TAB7 128 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 MYO7BQ6PIF6 2116 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 DHRS11Q6UWP2 260 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM200AQ86VY9 491 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF100Q8IYN0 542 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM217Q8N7C4 229 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 OR1S2Q8NGQ3 325 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 OR14L1PQ8NHC6 308 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 HDHD3Q9BSH5 251 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 METTL9Q9H1A3 318 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 LIME1Q9H400 295 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 PLK3Q9H4B4 646 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 DEPPQ9NTK1 212 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ANXA10Q9UJ72 324 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 CTSDP07339 412 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 B4GALT1P15291 398 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 PRKACBP22694 351 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ACP1P24666 158 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 AAED1Q7RTV5 226 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 OR10D3Q8NH80 312 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 OR2V1Q8NHB1 315 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 FGFBP3Q8TAT2 258 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF2Q9BSG1 426 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 SLC5A7Q9GZV3 580 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 METTL8Q9H825 291 aaKnown RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ELL3Q9HB65 397 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF701Q9NV72 531 aaPredicted RBP6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF581Q9P0T4 197 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF391Q9UJN7 358 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 TIMM10BQ9Y5J6 103 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 POMT1Q9Y6A1 747 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 GPR179Q6PRD1 2367 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 IGKV1-12A0A0C4DH73 117 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 CRYM-AS1A6NIL9 109 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 ANGPTL7O43827 346 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 CXCL13O43927 109 aa6.27□□□□□ -1.41
CLCN3-202ENST00000360642 IFNA2P01563 188 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms