RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 RNF224P0DH78 156 aa11.88□□□□□ -0.51
CCDC144A-203ENST00000360495 ZNF260Q3ZCT1 412 aa11.88□□□□□ -0.51
CCDC144A-203ENST00000360495 ZNF683Q8IZ20 524 aa11.88□□□□□ -0.51
CCDC144A-203ENST00000360495 OR10AC1Q8NH08 325 aa11.88□□□□□ -0.51
CCDC144A-203ENST00000360495 OR4C3Q8NH37 302 aa11.88□□□□□ -0.51
CCDC144A-203ENST00000360495 ZBP1Q9H171 429 aa11.88□□□□□ -0.51
CCDC144A-203ENST00000360495 CTXND1A0A1B0GTU2 59 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 BCL2P10415 239 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 KIR2DS2P43631 304 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 CDX1P47902 265 aaPredicted RBP11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 TMEM91Q6ZNR0 172 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 CLEC5AQ9NY25 188 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 MEX3AA1L020 520 aaKnown RBP11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 DLX1P56177 255 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 OR2V1Q8NHB1 315 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 SSMEM1Q8WWF3 244 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 MRPL37Q9BZE1 423 aaKnown RBP11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 PROCRQ9UNN8 238 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 VSIG4Q9Y279 399 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 IGHV3-43A0A0B4J1X8 118 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 NKX2-6A6NCS4 301 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 CFDP00746 253 aaPredicted RBP11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 SOD3P08294 240 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 IGHV3-43DP0DP04 118 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 CTLA4P16410 223 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 IGFBP6P24592 240 aaPredicted RBP11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 CD27P26842 260 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 CAPZBP47756 277 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 ALKBH6Q3KRA9 238 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 WNT2BQ93097 391 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 COL25A1Q9BXS0 654 aaPredicted RBP11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 PTP4A3O75365 173 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 MPZL1O95297 269 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 SRP14P37108 136 aaKnown RBP11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 C8orf82Q6P1X6 216 aaPredicted RBP11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 ADAMTS17Q8TE56 1095 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 ABHD3Q8WU67 409 aa11.87□□□□□ -0.51
CCDC144A-203ENST00000360495 CRXO43186 299 aaPredicted RBP11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 CDS2O95674 445 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 VSIG10L2P0DP72 767 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 OR1B1Q8NGR6 318 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 PHOSPHO2Q8TCD6 241 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 NINQ8N4C6 2090 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 ZNF137PP52743 207 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 LYZP61626 148 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 GAPTQ8N292 157 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 TLNRD1Q9H1K6 362 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 C6orf106Q9H6K1 298 aaPredicted RBP11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 A0A1W2PN81 502 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 SERTM1A2A2V5 107 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 ZNF362Q5T0B9 420 aaPredicted RBP11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 GGACTQ9BVM4 153 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 ALX4Q9H161 411 aaPredicted RBP11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 IL36GQ9NZH8 169 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 ALG1L2C9J202 215 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 ZNF774Q6NX45 483 aa11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 H1FOOQ8IZA3 346 aaPredicted RBP11.86□□□□□ -0.51
CCDC144A-203ENST00000360495 TRDCB7Z8K6 153 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 FFAR1O14842 300 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 SLC25A30Q5SVS4 291 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 DOLPP1Q86YN1 238 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 LINC01465Q8N7H1 131 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 AMER3Q8N944 861 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 TGIF2-C20orf24A0A0A6YYL0 155 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 PITX3O75364 302 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 C1QAP02745 245 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 TMIGD3P0DMS9 266 aaPredicted RBP11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 HIST1H1EP10412 219 aaKnown RBP11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 CA6P23280 308 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 LBX1P52954 281 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 PMCHL1Q16048 86 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 PLPPR5Q32ZL2 321 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 RSPO2Q6UXX9 243 aaPredicted RBP11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 SPPL3Q8TCT6 385 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 KLF13Q9Y2Y9 288 aaPredicted RBP11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 CYR61O00622 381 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 CXorf1O96002 111 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 HAND1O96004 215 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 ZGLP1P0C6A0 271 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 MMP16P51512 607 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 TGIF2LYQ8IUE0 185 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 FLYWCH2Q96CP2 140 aaKnown RBP11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 PCGF1Q9BSM1 259 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 PEX11BO96011 259 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 PPYP01298 95 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 AREGP15514 252 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 VASH2Q86V25 355 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 SLC25A33Q9BSK2 321 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 M0QZ24 198 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 KLF7O75840 302 aaPredicted RBP11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 MRPL58Q14197 206 aaKnown RBP11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 OR8B12Q8NGG6 310 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 MYOZ3Q8TDC0 251 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 R3HDM4Q96D70 268 aa11.85□□□□□ -0.51
CCDC144A-203ENST00000360495 SEBOXQ9HB31 216 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms