RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 RNFT1Q5M7Z0 435 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 OR10A7Q8NGE5 316 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 RAB33BQ9H082 229 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 TMEM30AQ9NV96 361 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 GP1BAP07359 652 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 CXCL3P19876 107 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 YBX1P67809 324 aaKnown RBP14.2□□□□□ -0.14
COL18A1-203ENST00000359759 RIGQ13278 110 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 OR1N2Q8NGR9 330 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 ABHD1Q96SE0 405 aa14.2□□□□□ -0.14
COL18A1-203ENST00000359759 CORTO00230 105 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 CLEC18BQ6UXF7 455 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 OR6C3Q9NZP0 311 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 OR8B12Q8NGG6 310 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 OR13G1Q8NGZ3 307 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 TMEM167BQ9NRX6 74 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 PDCD6O75340 191 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 IGLV3-27P01718 113 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 OR10D3Q8NH80 312 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 ZNF552Q9H707 407 aaPredicted RBP14.19□□□□□ -0.14
COL18A1-203ENST00000359759 SOCS1O15524 211 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 WDFY2Q96P53 400 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 F12P00748 615 aaPredicted RBP14.19□□□□□ -0.14
COL18A1-203ENST00000359759 SNRPCP09234 159 aaKnown RBP14.19□□□□□ -0.14
COL18A1-203ENST00000359759 IL24Q13007 206 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 ZG16BQ96DA0 208 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 EAF1Q96JC9 268 aaPredicted RBP14.19□□□□□ -0.14
COL18A1-203ENST00000359759 STARD10Q9Y365 291 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 LGALS7P47929 136 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 LYPD8Q6UX82 237 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 ANKRD37Q7Z713 158 aa14.19□□□□□ -0.14
COL18A1-203ENST00000359759 NUP98P52948 1817 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 TRBV5-4A0A0C4DH59 114 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 TMEM218A2RU14 115 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 P2RY1P47900 373 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 C3AR1Q16581 482 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 GUSBP11Q6P575 273 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 PRNTQ86SH4 94 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 KMT5CQ86Y97 462 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 PHF7Q9BWX1 381 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-203ENST00000359759 GPR61Q9BZJ8 451 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 CXXC4Q9H2H0 198 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 IGSF23A1L1A6 192 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 PLPP3O14495 311 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 NTN1O95631 604 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 KLF3P57682 345 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-203ENST00000359759 PPP1CAP62136 330 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 ANKRD55Q3KP44 614 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 DDX60Q8IY21 1712 aaKnown RBP14.18□□□□□ -0.14
COL18A1-203ENST00000359759 HLA-BQ31612 363 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 LBHQ53QV2 105 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-203ENST00000359759 OR11H7Q8NGC8 314 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 FGF14Q92915 247 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 LINC00615Q96LM1 132 aaPredicted RBP14.18□□□□□ -0.14
COL18A1-203ENST00000359759 VSIG4Q9Y279 399 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 AGFG2O95081 481 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 CLDN18P56856 261 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 PKIAP61925 76 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 PRICKLE4Q2TBC4 344 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 C16orf82Q7Z2V1 217 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 GAPTQ8N292 157 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 NTMQ9P121 344 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 C2CD4DB7Z1M9 353 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 CA2P00918 260 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 SOSTQ9BQB4 213 aa14.18□□□□□ -0.14
COL18A1-203ENST00000359759 H3BQ15 152 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 FGF9P31371 208 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-203ENST00000359759 RNPS1Q15287 305 aaKnown RBP14.17□□□□□ -0.14
COL18A1-203ENST00000359759 TMEM196Q5HYL7 178 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 RAB37Q96AX2 223 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 hADV38S2A0JD32 116 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 K7EQS6 105 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 M0QZK8 103 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 GNG7O60262 68 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 SMPD2O60906 423 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 TMEM127O75204 238 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 GGCTO75223 188 aaKnown RBP14.17□□□□□ -0.14
COL18A1-203ENST00000359759 DEDDO75618 318 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 SRSF5Q13243 272 aaKnown RBP14.17□□□□□ -0.14
COL18A1-203ENST00000359759 RTP5Q14D33 572 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 TWIST1Q15672 202 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 ADIPOQQ15848 244 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 TMEM255AQ5JRV8 349 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 THSD4Q6ZMP0 1018 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 SH2D5Q6ZV89 423 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 HMSDA8MTL9 139 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 TRDCB7Z8K6 153 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 MBPP02686 304 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-203ENST00000359759 ZNF250P15622 560 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 C10orf113Q5VZT2 155 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 OR4X1Q8NH49 305 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 THYN1Q9P016 225 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 IGHV3OR15-7A0A075B7D8 119 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 C7orf77A4D0Y5 90 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 CD99P14209 185 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 VAX2Q9UIW0 290 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 MYO9BQ13459 2157 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 HOXB3P14651 431 aaPredicted RBP14.17□□□□□ -0.14
COL18A1-203ENST00000359759 Q6ZS52 159 aa14.17□□□□□ -0.14
COL18A1-203ENST00000359759 LDLRAD3Q86YD5 345 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms