RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 CISD2Q8N5K1 135 aaKnown RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 OR51S1Q8NGJ8 323 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 FOXRED1Q96CU9 486 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ARHGAP5-AS1Q96IT6 56 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 HDHD3Q9BSH5 251 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 LINC00470Q9BZP3 86 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 CHST5Q9GZS9 411 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 PRDM14Q9GZV8 571 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 FGF23Q9GZV9 251 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 LPAR5Q9H1C0 372 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 C20orf85Q9H1P6 137 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 DPAGT1Q9H3H5 408 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ASH1LQ9NR48 2969 aaKnown RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 DKK4Q9UBT3 224 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 RAXQ9Y2V3 346 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ABCA4P78363 2273 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 CACNA1DQ01668 2161 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 IGKV1-12A0A0C4DH73 117 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 hCG_38984A0A1B0GV85 526 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 PLSCR5A0PG75 271 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 FAM74A7A6NL05 159 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 RPL36A-HNRNPH2H7BZ11 118 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 H7C417 338 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 CTDSPLO15194 276 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ATG12O94817 140 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 TOXO94900 526 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 NXPH2O95156 264 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 NRASP01111 189 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 IFNA17P01571 189 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 IGKV1D-12P01611 117 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 RLN1P04808 185 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 CXCL3P19876 107 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 DTYMKP23919 212 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 FCN2Q15485 313 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 USF2Q15853 346 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ST3GAL2Q16842 350 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 GSG1Q2KHT4 349 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 KRTAP27-1Q3LI81 207 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 PIGYQ3MUY2 71 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ACSF3Q4G176 576 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 FAM74A3Q4VXF1 159 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 NKAPLQ5M9Q1 402 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 RTL6Q6ICC9 239 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 C5orf24Q7Z6I8 188 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF610Q8N9Z0 462 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 OR2D3Q8NGH3 330 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 OR51T1Q8NGJ9 327 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 NEK7Q8TDX7 302 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 SSC4DQ8WTU2 575 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 BCL2L2Q92843 193 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 RAB3CQ96E17 227 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 MISP3Q96FF7 219 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 WDR89Q96FK6 387 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 GMPPAQ96IJ6 420 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 BOD1Q96IK1 185 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 POM121L2Q96KW2 1035 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 DMRTA2Q96SC8 542 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 PCGF1Q9BSM1 259 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 DPCDQ9BVM2 203 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 TMEM59Q9BXS4 323 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 CHST6Q9GZX3 395 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 IL36RNQ9UBH0 155 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 MTFP1Q9UDX5 166 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 RAB22AQ9UL26 194 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 CFAP46Q8IYW2 2715 aa4.38□□□□□ -1.71
ATXN3-202ENST00000359366 MAP1AP78559 2803 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-202ENST00000359366 TMEM14DPA8MWL7 114 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 F8VVB4 439 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 F8VWA3 439 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 PYCARD-AS1I3L0S3 204 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 AQP7O14520 342 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 SIGLEC5O15389 551 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 FABP7O15540 132 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 SLC25A17O43808 307 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 LY86O95711 162 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 PMP2P02689 132 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 PPBPP02775 128 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 ERCC1P07992 297 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-202ENST00000359366 CD37P11049 281 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 MGMTP16455 207 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 CFPP27918 469 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 MPGP29372 298 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 PTGER4P35408 488 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 OR3A2P47893 321 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 GPM6AP51674 278 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 TMEM50BP56557 158 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 RBX1P62877 108 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 BLOC1S1P78537 153 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 MRPS11P82912 194 aaKnown RBP4.37□□□□□ -1.71
ATXN3-202ENST00000359366 DEFA5Q01523 94 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 TAF9Q16594 264 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 ALKBH6Q3KRA9 238 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 ZNF260Q3ZCT1 412 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 SCGB2B2Q4G0G5 96 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 OR2T2Q6IF00 324 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 FAM214BQ7L5A3 538 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 BHLHA15Q7RTS1 189 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-202ENST00000359366 C6orf201Q7Z4U5 140 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 CALHM1Q8IU99 346 aa4.37□□□□□ -1.71
ATXN3-202ENST00000359366 PDZD9Q8IXQ8 264 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms