RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PLAUP00749 431 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 CD74P04233 296 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 GLAP06280 429 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF44P15621 663 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 AMY2BP19961 511 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 DTYMKP23919 212 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 LOXP28300 417 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 CFHR2P36980 270 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 RBM39Q14498 530 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 DAZAP2Q15038 168 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 PDCD1Q15116 288 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 ACP7Q6ZNF0 438 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 GLCCI1Q86VQ1 547 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 HOGA1Q86XE5 327 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 OR11L1Q8NGX0 322 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 NEK7Q8TDX7 302 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 FBXW5Q969U6 566 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 ERGIC1Q969X5 290 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 CREB3L1Q96BA8 519 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 MDFIQ99750 246 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 TMEM204Q9BSN7 226 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 C12orf4Q9NQ89 552 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 RASL12Q9NYN1 266 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 CISD1Q9NZ45 108 aaKnown RBP11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 NUBP2Q9Y5Y2 271 aa11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 RAI1Q7Z5J4 1906 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-203ENST00000359265 SRRM5B3KS81 715 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 DISC1C4P0D8 188 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 SH2D1BO14796 132 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 DEGS1O15121 323 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 KNG1P01042 644 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 TCRBP04435 133 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 TNFRSF1AP19438 455 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 HLA-DMAP28067 261 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 DUSP1P28562 367 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 CCR6P51684 374 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 TAS2R46P59540 309 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 GMFBP60983 142 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF146Q15072 292 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 ZMYND11Q15326 602 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF672Q499Z4 452 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 FAM209AQ5JX71 171 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 SFRP4Q6FHJ7 346 aaPredicted RBP11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 FAAP20Q6NZ36 180 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 Q6P435 159 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 BTN2A1Q7KYR7 527 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 MOGAT3Q86VF5 341 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 ZNF295-AS1Q8N0V1 137 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 BEST4Q8NFU0 473 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 OR4S1Q8NGB4 309 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 UPRTQ96BW1 309 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 SPOCK3Q9BQ16 436 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 EGLN1Q9GZT9 426 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 EDARQ9UNE0 448 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 ARFGEF3Q5TH69 2177 aa11.67□□□□□ -0.54
PDLIM5-203ENST00000359265 M0QYG6 137 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 HAND1O96004 215 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 AMY2AP04746 511 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 FCGR3AP08637 254 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 MDH2P40926 338 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 BCAP31P51572 246 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 BTG1P62324 171 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 RBMS2Q15434 407 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 PAN3Q58A45 887 aaKnown RBP11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 OR52W1Q6IF63 320 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 FAM90A1Q86YD7 464 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 BPIFB2Q8N4F0 458 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 OR5H2Q8NGV7 314 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 OR4K15Q8NH41 348 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 Q8TCH9 128 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 SNAPC3Q92966 411 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 CYYR1Q96J86 154 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 HDHD3Q9BSH5 251 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 MARVELD1Q9BSK0 173 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 ST6GALNAC5Q9BVH7 336 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 DPCDQ9BVM2 203 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 TINAGL1Q9GZM7 467 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 MS4A5Q9H3V2 200 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 CHMP1AQ9HD42 196 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 NUDT15Q9NV35 164 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 RNF7Q9UBF6 113 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 SCP2D1Q9UJQ7 156 aa11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 FBXO9Q9UK97 447 aaPredicted RBP11.66□□□□□ -0.54
PDLIM5-203ENST00000359265 TRAV24A0A0B4J272 114 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 FUOMA2VDF0 154 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 INMT-MINDY4F8WBC2 141 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 SIRPB1O00241 398 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 HSPB6O14558 160 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 WNT9BO14905 357 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 NDUFB6O95139 128 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 OR2H2O95918 312 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 IFNA6P05013 189 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 IRF2P14316 349 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 HRH1P35367 487 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 SNRPD2P62316 118 aaKnown RBP11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 CHRFAM7AQ494W8 412 aa11.65□□□□□ -0.54
PDLIM5-203ENST00000359265 SPRNQ5BIV9 151 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms