RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SRPXP78539 464 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 ARF1P84077 181 aaKnown RBP7.39□□□□□ -1.23
RFX3-202ENST00000358730 PRDX4Q13162 271 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 GUK1Q16774 197 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 C6orf15Q6UXA7 325 aaPredicted RBP7.39□□□□□ -1.23
RFX3-202ENST00000358730 MRPL21Q7Z2W9 205 aaKnown RBP7.39□□□□□ -1.23
RFX3-202ENST00000358730 DPPA2Q7Z7J5 298 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 NEK7Q8TDX7 302 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 HPSE2Q8WWQ2 592 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 TMEM45BQ96B21 275 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 C14orf79Q96F83 325 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 SMOC1Q9H4F8 434 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 RPS10P5Q9NQ39 176 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 LRFN1Q9P244 771 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 UBE2J1Q9Y385 318 aaPredicted RBP7.39□□□□□ -1.23
RFX3-202ENST00000358730 A0A1B0GV50 99 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 PQLC2LA1A4F0 135 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 C5orf49A4QMS7 147 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 NKX2-6A6NCS4 301 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 HLA-HP01893 362 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 TK1P04183 234 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 GNRHRP30968 328 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 HOXA1P49639 335 aaPredicted RBP7.39□□□□□ -1.23
RFX3-202ENST00000358730 EWSR1Q01844 656 aaKnown RBP eCLIP7.39□□□□□ -1.23
RFX3-202ENST00000358730 FOXO1Q12778 655 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 HMGN3Q15651 99 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 AWAT1Q58HT5 328 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 TMEM182Q6ZP80 229 aaPredicted RBP7.39□□□□□ -1.23
RFX3-202ENST00000358730 TIPARPQ7Z3E1 657 aaKnown RBP7.39□□□□□ -1.23
RFX3-202ENST00000358730 C5orf24Q7Z6I8 188 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 TBC1D26Q86UD7 250 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 ZNF695Q8IW36 515 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 COMMD1Q8N668 190 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 ZNF565Q8N9K5 539 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 BOD1Q96IK1 185 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 TMEM222Q9H0R3 208 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 PRO3102Q9H379 93 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 CRIM1Q9NZV1 1036 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 IL36RNQ9UBH0 155 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 DNAJC13O75165 2243 aa7.39□□□□□ -1.23
RFX3-202ENST00000358730 TRDCB7Z8K6 153 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 PMELP40967 661 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 KCNJ3P48549 501 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 CLINT1Q14677 625 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 SSPNQ14714 243 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 NRN1LQ496H8 165 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 COLCA1Q6ZS62 124 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 ZDHHC23Q8IYP9 409 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM185AQ8N0U4 392 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 OR2C3Q8N628 320 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM213BQ8TBF2 198 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 THOC3Q96J01 351 aaKnown RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 CLCC1Q96S66 551 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 GPHA2Q96T91 129 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 USB1Q9BQ65 265 aaKnown RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 FGF23Q9GZV9 251 aaPredicted RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 CALHM2Q9HA72 323 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 MRPS18CQ9Y3D5 142 aaKnown RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 STRAPQ9Y3F4 350 aaKnown RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 CELSR3Q9NYQ7 3312 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 COLCA2A8K830 154 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 M0R036 132 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 SSSCA1O60232 199 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 CDS2O95674 445 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 CELA3AP09093 270 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 SCTP09683 121 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 NKX2-1P43699 371 aaPredicted RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 RAB5CP51148 216 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FGF12P61328 243 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 POLR2GP62487 172 aaKnown RBP eCLIP7.38□□□□□ -1.23
RFX3-202ENST00000358730 LPAL2Q16609 132 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 PSMF1Q92530 271 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 HS3ST6Q96QI5 342 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 SPIN2AQ99865 258 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 SPIN2BQ9BPZ2 258 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 REPIN1Q9BWE0 567 aaKnown RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 ESRP2Q9H6T0 727 aaKnown RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 ZNF703Q9H7S9 590 aaPredicted RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 SPACA1Q9HBV2 294 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 RYDENQ9NUL5 291 aaKnown RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 ATPIF1Q9UII2 106 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 ZNF407Q9C0G0 2248 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 IGKV3D-15A0A087WSY6 115 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A10PA6NDY2 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A18PA6NE21 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A16PA6NEW6 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM24AA6NFZ4 105 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A20PA6NIJ5 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A8PA6NJQ4 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 ZNF98A6NK75 572 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A7PA6NKC0 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A22PA8MWA6 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A12PA8MX19 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A5PA8MXJ8 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A23PA8MXZ1 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 SNRNP70P08621 437 aaKnown RBP7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A15PP0C7V4 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A13PP0C7W8 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A14PP0C7W9 464 aa7.38□□□□□ -1.23
RFX3-202ENST00000358730 FAM90A24PP0C7X0 464 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms