RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 OR5B12Q96R08 314 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 TP53RKQ96S44 253 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CABLES2Q9BTV7 478 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 PLEKHF2Q9H8W4 249 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 UFSP2Q9NUQ7 469 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 NCOR1O75376 2440 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CXorf65A6NEN9 183 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 MPPED1O15442 326 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 TUSC2O75896 110 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 RND3P61587 244 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CFHR1Q03591 330 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 IL13RA2Q14627 380 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 ZNF787Q6DD87 383 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 GAPTQ8N292 157 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 COMMD1Q8N668 190 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 OR1F12Q8NHA8 337 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 SNIP1Q8TAD8 396 aaKnown RBP5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CALHM2Q9HA72 323 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 CCL28Q9NRJ3 127 aa5.72□□□□□ -1.49
CSDE1-203ENST00000358528 C3orf80F5H4A9 247 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 EIF1BO60739 113 aaKnown RBP5.71□□□□□ -1.49
CSDE1-203ENST00000358528 OR8U8P0C7N1 319 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 PRF1P14222 555 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 FUT3P21217 361 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 CCL7P80098 99 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 SPEM2Q0P670 501 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 TMEM187Q14656 261 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 MYPOPQ86VE0 399 aaPredicted RBP5.71□□□□□ -1.49
CSDE1-203ENST00000358528 LRP11Q86VZ4 500 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 LHFPL1Q86WI0 220 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 RPS19BP1Q86WX3 136 aaKnown RBP5.71□□□□□ -1.49
CSDE1-203ENST00000358528 C1orf87Q8N0U7 546 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 FAM210BQ96KR6 192 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 SSX3Q99909 188 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 MRPL13Q9BYD1 178 aaKnown RBP5.71□□□□□ -1.49
CSDE1-203ENST00000358528 SLC39A9Q9NUM3 307 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 OR14J1Q9UGF5 321 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 TMED3Q9Y3Q3 217 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 TIMM10BQ9Y5J6 103 aa5.71□□□□□ -1.49
CSDE1-203ENST00000358528 PMS2P1A4D2B8 440 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 AQP7P3A6NL99 342 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 SOX15O60248 233 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 PDCD6O75340 191 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 CLDN1O95832 211 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 CD200P41217 278 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 NPBWR2P48146 333 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 SSR4P51571 173 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 RPS23P62266 143 aaKnown RBP5.71□□□□□ -1.5
CSDE1-203ENST00000358528 PMP22Q01453 160 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 HLA-BQ31612 363 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 RHBDD2Q6NTF9 364 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 LHFPL2Q6ZUX7 228 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 SYT13Q7L8C5 426 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 OR1K1Q8NGR3 316 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 OIT3Q8WWZ8 545 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 SPSB1Q96BD6 273 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 POM121Q96HA1 1249 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 RSG1Q9BU20 258 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 PLA2G2EQ9NZK7 142 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 LAMP3Q9UQV4 416 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 MRPS17Q9Y2R5 130 aaKnown RBP5.71□□□□□ -1.5
CSDE1-203ENST00000358528 FER1L5A0AVI2 2057 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 DOCK11Q5JSL3 2073 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF816-ZNF321PA0A0X1KG74 233 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 LOC102725191A0A1B0GVB3 256 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 A0A1W2PPQ1 181 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 C5orf49A4QMS7 147 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 IFNA10P01566 189 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 HBE1P02100 147 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 SCTP09683 121 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF17P17021 662 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 ZXDAP98168 799 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 LTC4SQ16873 150 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 WIPI1Q5MNZ9 446 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-203ENST00000358528 GFI1BQ5VTD9 330 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 MRPL41Q8IXM3 137 aaKnown RBP5.71□□□□□ -1.5
CSDE1-203ENST00000358528 TMEM252Q8N6L7 170 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 Q96M66 194 aa5.71□□□□□ -1.5
CSDE1-203ENST00000358528 C1orf147Q96MC9 270 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-203ENST00000358528 METTL1Q9UBP6 276 aaKnown RBP5.71□□□□□ -1.5
CSDE1-203ENST00000358528 IGSF23A1L1A6 192 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 CYTIPO60759 359 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 MRPL33O75394 65 aaKnown RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 HEXAP06865 529 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 MPZP25189 248 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 NXPH1P58417 271 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF92Q03936 586 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 LPAL2Q16609 132 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 SPATA46Q5T0L3 261 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 RABEPKQ7Z6M1 372 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 SLC25A45Q8N413 288 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ADPRHL1Q8NDY3 354 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 OR56B2PQ8NGI1 322 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 TMEM37Q8WXS4 190 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 GNPNAT1Q96EK6 184 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-203ENST00000358528 CCDC74BQ96LY2 380 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF488Q96MN9 340 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ZNF665Q9H7R5 613 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 WBP1LQ9NX94 342 aa5.7□□□□□ -1.5
CSDE1-203ENST00000358528 ERRFI1Q9UJM3 462 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms