RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 C5orf66Q9H5L9 145 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 LOC102723971A0A1B0GUV8 181 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 CXCL10P02778 98 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 HNF1AP20823 631 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 DCAF10Q5QP82 559 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 OR4F5Q8NH21 305 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 CLDN23Q96B33 292 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 OR4F4Q96R69 305 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 OR2W1Q9Y3N9 320 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 M0R135 149 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 PEX12O00623 359 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ACTL6AO96019 429 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 SEC11AP67812 179 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 INSL4Q14641 139 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM182Q6ZP80 229 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 OR4N2Q8NGD1 307 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF799Q96GE5 643 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 KCNE3Q9Y6H6 103 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF816-ZNF321PA0A0X1KG74 233 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF17P17021 662 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 RAC3P60763 192 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 SPSB4Q96A44 273 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 A0A1B0GX78 115 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 RPS18P62269 152 aaKnown RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 RTN4RL1Q86UN2 441 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 DEFB126Q9BYW3 111 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZFP30Q9Y2G7 519 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF407Q9C0G0 2248 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TANC1Q9C0D5 1861 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TNFSF4P23510 183 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 MBD3L1Q8WWY6 194 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 SPACA9Q96E40 222 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TAF1LQ8IZX4 1826 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 CTXND1A0A1B0GTU2 59 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 SPINT2O43291 252 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 GZMHP20718 246 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 FASLGP48023 281 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM217Q8N7C4 229 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ULBP2Q9BZM5 246 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TSC2P49815 1807 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 A0A1W2PN81 502 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 PRICKLE3O43900 615 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ICOSLGO75144 302 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TIMP1P01033 207 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ACAA1P09110 424 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TMIGD3P0DMS9 266 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 CHRNA7P36544 502 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 RND2P52198 227 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 IGLV3-21P80748 117 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 IER2Q9BTL4 223 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 NYNRINQ9P2P1 1898 aaKnown RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 A0A0U1RQK1 487 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF320A2RRD8 509 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 SSSCA1O60232 199 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 KBTBD11O94819 623 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ATP6V0CP27449 155 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 DSCR4P56555 118 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 SMAD2Q15796 467 aaKnown RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF845Q96IR2 970 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 PECRQ9BY49 303 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 H3BMH7 237 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ELOBQ15370 118 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF766Q5HY98 468 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 SPNS3Q6ZMD2 512 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 FA2HQ7L5A8 372 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 MRGPRDQ8TDS7 321 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ADAT1Q9BUB4 502 aaKnown RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 DECR2Q9NUI1 292 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 NPBWR1P48145 328 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 EWSR1Q01844 656 aaKnown RBP eCLIP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 BEX5Q5H9J7 111 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 CBLN2Q8IUK8 224 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 APOBEC3DQ96AK3 386 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 KLRF1Q9NZS2 232 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 FER1L5A0AVI2 2057 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TMEM88BA6NKF7 163 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 ZNF891A8MT65 544 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 C1QTNF9BB2RNN3 333 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 OR4A8P0C604 315 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 FZD5Q13467 585 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 STUMQ69YW2 141 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 MEX3BQ6ZN04 569 aaKnown RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 OR5A1Q8NGJ0 315 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 OR4A4PQ8NGN8 299 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 NPVFQ9HCQ7 196 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TECRQ9NZ01 308 aaKnown RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 MPC1Q9Y5U8 109 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 FBXO45P0C2W1 286 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 IGFBP3P17936 291 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-204ENST00000358025 RUNX2Q13950 521 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 LY6G6FQ5SQ64 297 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 POM121L2Q96KW2 1035 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 TP53RKQ96S44 253 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 PIGLQ9Y2B2 252 aa3.63□□□□□ -1.83
SYNE2-204ENST00000358025 FAM90A9PA6NNJ1 464 aa3.62□□□□□ -1.83
SYNE2-204ENST00000358025 A8MWL6 223 aa3.62□□□□□ -1.83
SYNE2-204ENST00000358025 OTX1P32242 354 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-204ENST00000358025 RPL24P83731 157 aaKnown RBP3.62□□□□□ -1.83
SYNE2-204ENST00000358025 C9orf135Q5VTT2 229 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms