RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 FAM90A7PA6NKC0 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A22PA8MWA6 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A12PA8MX19 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A5PA8MXJ8 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A23PA8MXZ1 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 NDUFA2O43678 99 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A15PP0C7V4 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A13PP0C7W8 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A14PP0C7W9 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 FAM90A24PP0C7X0 464 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 CDK2P24941 298 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 OLFML2AQ68BL7 652 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 RAB12Q6IQ22 244 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 ZNF561Q8N587 486 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 TMEM185AQ8NFB2 350 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 OR10R2Q8NGX6 335 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 DPCDQ9BVM2 203 aaPredicted RBP21.09■□□□□ 0.97
SSBP3-202ENST00000357475 ZMAT3Q9HA38 289 aaKnown RBP21.09■□□□□ 0.97
SSBP3-202ENST00000357475 ELF5Q9UKW6 265 aaPredicted RBP21.09■□□□□ 0.97
SSBP3-202ENST00000357475 MED13LQ71F56 2210 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 YLPM1P49750 1951 aaKnown RBP21.09■□□□□ 0.97
SSBP3-202ENST00000357475 OTOGQ6ZRI0 2925 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 DVL1O14640 695 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 APOA1P02647 267 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 SLC36A1Q7Z2H8 476 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 OR56B1Q8NGI3 324 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 SULT4A1Q9BR01 284 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 MMP27Q9H306 513 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 MIOXQ9UGB7 285 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 KCNK7Q9Y2U2 307 aa21.09■□□□□ 0.97
SSBP3-202ENST00000357475 METTL21EPA6NDL7 271 aa21.08■□□□□ 0.96
SSBP3-202ENST00000357475 K7N7A8 449 aa21.08■□□□□ 0.96
SSBP3-202ENST00000357475 PDCD6O75340 191 aa21.08■□□□□ 0.96
SSBP3-202ENST00000357475 TK1P04183 234 aa21.08■□□□□ 0.96
SSBP3-202ENST00000357475 FUT3P21217 361 aa21.08■□□□□ 0.96
SSBP3-202ENST00000357475 ATXN7L3Q14CW9 347 aaPredicted RBP21.08■□□□□ 0.96
SSBP3-202ENST00000357475 PAN3Q58A45 887 aaKnown RBP21.08■□□□□ 0.96
SSBP3-202ENST00000357475 OR4M1Q8NGD0 313 aa21.08■□□□□ 0.96
SSBP3-202ENST00000357475 NEIL1Q96FI4 390 aaPredicted RBP21.08■□□□□ 0.96
SSBP3-202ENST00000357475 FAAP24Q9BTP7 215 aa21.08■□□□□ 0.96
SSBP3-202ENST00000357475 ING3Q9NXR8 418 aa21.08■□□□□ 0.96
SSBP3-202ENST00000357475 UBE2QL1A1L167 161 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 FAM25AB3EWG3 89 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 FAM25CB3EWG5 89 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 FAM25GB3EWG6 89 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 PHF1O43189 567 aaPredicted RBP21.07■□□□□ 0.96
SSBP3-202ENST00000357475 GNB3P16520 340 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 USF1P22415 310 aaPredicted RBP21.07■□□□□ 0.96
SSBP3-202ENST00000357475 CIARTQ8N365 385 aaPredicted RBP21.07■□□□□ 0.96
SSBP3-202ENST00000357475 CHST4Q8NCG5 386 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 OR8B3Q8NGG8 313 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 PLPPR1Q8TBJ4 325 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 MED30Q96HR3 178 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 SNX22Q96L94 193 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 OR8B2Q96RD0 313 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 PECRQ9BY49 303 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 REG4Q9BYZ8 158 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 A3GALT2U3KPV4 340 aa21.07■□□□□ 0.96
SSBP3-202ENST00000357475 MALRD1Q5VYJ5 2156 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 DSCAML1Q8TD84 2053 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 CELSR1Q9NYQ6 3014 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 PTHLHP12272 177 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 GRK1Q15835 563 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 Q6ZTK2 550 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 TPRX1Q8N7U7 411 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 RAB40AQ8WXH6 277 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 RAB3CQ96E17 227 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 S100A16Q96FQ6 103 aaKnown RBP21.06■□□□□ 0.96
SSBP3-202ENST00000357475 CMTM3Q96MX0 182 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 NEDD4LQ96PU5 975 aa21.06■□□□□ 0.96
SSBP3-202ENST00000357475 SLC25A10Q9UBX3 287 aaPredicted RBP21.06■□□□□ 0.96
SSBP3-202ENST00000357475 FAM157AC9JC47 383 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 NDUFB3O43676 98 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 CLPXO76031 633 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 TNFSF8P32971 234 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 CNIH2Q6PI25 160 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 OR8H2Q8N162 312 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 ST8SIA4Q92187 359 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 COQ2Q96H96 371 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 POM121Q96HA1 1249 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 PLEKHJ1Q9NW61 149 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 PTTG2Q9NZH5 202 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 EXTL2Q9UBQ6 330 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 TEX15Q9BXT5 2789 aa21.05■□□□□ 0.96
SSBP3-202ENST00000357475 TRAV18A0A075B6X5 111 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 MEX3AA1L020 520 aaKnown RBP21.04■□□□□ 0.96
SSBP3-202ENST00000357475 NDUFB7P17568 137 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 ZFP36P26651 326 aaKnown RBP21.04■□□□□ 0.96
SSBP3-202ENST00000357475 AESQ08117 197 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 EDDM3AQ14507 147 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 WDR25Q64LD2 544 aaPredicted RBP21.04■□□□□ 0.96
SSBP3-202ENST00000357475 NLRC3Q7RTR2 1065 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 OR6Q1Q8NGQ2 317 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 KIAA1324LA8MWY0 1029 aaPredicted RBP21.04■□□□□ 0.96
SSBP3-202ENST00000357475 MFNGO00587 321 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 HIST1H1DP16402 221 aaKnown RBP21.04■□□□□ 0.96
SSBP3-202ENST00000357475 NEK7Q8TDX7 302 aa21.04■□□□□ 0.96
SSBP3-202ENST00000357475 GCDHQ92947 438 aaPredicted RBP21.04■□□□□ 0.96
SSBP3-202ENST00000357475 HDHD3Q9BSH5 251 aaPredicted RBP21.04■□□□□ 0.96
SSBP3-202ENST00000357475 SPACA1Q9HBV2 294 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms