RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 PRRX1P54821 245 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 POLR2GP62487 172 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMC4-202ENST00000357388 PPP2CBP62714 309 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 EWSR1Q01844 656 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMC4-202ENST00000357388 ZNF141Q15928 474 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 DMKNQ6E0U4 476 aaPredicted RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 ZBTB34Q8NCN2 500 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 MARVELD3Q96A59 401 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 KTI12Q96EK9 354 aaPredicted RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 TMEM70Q9BUB7 260 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 MRPL13Q9BYD1 178 aaKnown RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 IGHV3-64DA0A0J9YX35 117 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 SPTY2D1-AS1A0A0U1RR47 76 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 OGG1O15527 345 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 SBK3P0C264 359 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 MRPL54Q6P161 138 aaKnown RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 FBXL6Q8N531 539 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 OR11H7Q8NGC8 314 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 OR2D2Q9H210 308 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 A0A1B0GU03 582 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 DNASE2O00115 360 aaPredicted RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 SOCS7O14512 581 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 KIR2DL1P43626 348 aaPredicted RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 KIR2DL2P43627 348 aaPredicted RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 PSG5Q15238 335 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 C16orf82Q7Z2V1 217 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 NPEPL1Q8NDH3 523 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 MRPL30Q8TCC3 161 aaKnown RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 EID2BQ96D98 161 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 SIRT5Q9NXA8 310 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 TNFSF18Q9UNG2 199 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 MMP9P14780 707 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 YBX1P67809 324 aaKnown RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 ZG16BQ96DA0 208 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 NRIP2Q9BQI9 281 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 SAP30LQ9HAJ7 183 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 IL36GQ9NZH8 169 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 PSG11Q9UQ72 335 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 GON4LQ3T8J9 2241 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 NAV1Q8NEY1 1877 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 TCL1AP56279 114 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 TBC1D26Q86UD7 250 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 LINC00518Q8N0U6 118 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 OR1P1Q8NH06 330 aa11.39□□□□□ -0.59
SMC4-202ENST00000357388 HSD17B10Q99714 261 aaKnown RBP11.39□□□□□ -0.59
SMC4-202ENST00000357388 CXorf65A6NEN9 183 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 TRDCB7Z8K6 153 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 GFERP55789 205 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 SPEM2Q0P670 501 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 KLF9Q13886 244 aaPredicted RBP11.38□□□□□ -0.59
SMC4-202ENST00000357388 FAM219AQ8IW50 185 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 ASB1Q9Y576 335 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 FAM90A27PA6NNH2 459 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 NKX2-2O95096 273 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 GAPDHP04406 335 aaKnown RBP11.38□□□□□ -0.59
SMC4-202ENST00000357388 SFTPCP11686 197 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 CNRIP1Q96F85 164 aaPredicted RBP11.38□□□□□ -0.59
SMC4-202ENST00000357388 TNFRSF12AQ9NP84 129 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 CD40P25942 277 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 COL19A1Q14993 1142 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 TMEM196Q5HYL7 178 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 PWWP2BQ6NUJ5 590 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 ZNF880Q6PDB4 577 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 RTN4RL1Q86UN2 441 aaPredicted RBP11.38□□□□□ -0.59
SMC4-202ENST00000357388 OR2Z1Q8NG97 314 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 DTD1Q8TEA8 209 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 OR4C46A6NHA9 309 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 LYZP61626 148 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 SERF2P84101 59 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 HOXA4Q00056 320 aaPredicted RBP11.38□□□□□ -0.59
SMC4-202ENST00000357388 OR1N2Q8NGR9 330 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 VCX2Q9H322 139 aa11.38□□□□□ -0.59
SMC4-202ENST00000357388 IGHV3-15A0A0B4J1V0 119 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 C7orf66A4D0T2 115 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 DHRS7CA6NNS2 312 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 CXCL10P02778 98 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 NUMA1Q14980 2115 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 CNTD2Q9H8S5 307 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 COL16A1Q07092 1604 aaPredicted RBP11.37□□□□□ -0.59
SMC4-202ENST00000357388 hADV38S2A0JD32 116 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 K7ESF4 209 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 PAGE4O60829 102 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 ADAP1O75689 374 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 IGF2P01344 180 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 FAM157CP0CG43 387 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 BCL2P10415 239 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 SLC25A30Q5SVS4 291 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 LYG1Q8N1E2 194 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 OR4P4Q8NGL7 312 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 FAM206AQ9NX38 181 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 CHST1O43916 411 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 COMPP49747 757 aaPredicted RBP11.37□□□□□ -0.59
SMC4-202ENST00000357388 ERVFRD-1P60508 538 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 SFTPA2Q8IWL1 248 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 SFTPA1Q8IWL2 248 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 R3HDM4Q96D70 268 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 OR2W1Q9Y3N9 320 aa11.37□□□□□ -0.59
SMC4-202ENST00000357388 MPC1Q9Y5U8 109 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms