RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 TXNDC12O95881 172 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 IGF2P01344 180 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 Q3ZCU0 254 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 DMRTC1Q5HYR2 192 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 SMDT1Q9H4I9 107 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 MIA3Q5JRA6 1907 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 FAM24AA6NFZ4 105 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 TMEM11P17152 192 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 FSTP19883 344 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 HLA-DRB3P79483 266 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 SLC26A10Q8NG04 563 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 ATP5SQ99766 215 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 HES7Q9BYE0 225 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 SLC26A1Q9H2B4 701 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 IL36GQ9NZH8 169 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 MMP24Q9Y5R2 645 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 TRAV38-1A0A0B4J264 116 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 TMEM210A6NLX4 147 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 PAX6P26367 422 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 ZNF66Q6ZN08 573 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 OR5M9Q8NGP3 310 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 OR2D2Q9H210 308 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 GPR27Q9NS67 375 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 SERTM2A0A1B0GWG4 89 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 PLA2G10O15496 165 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 KLK10O43240 276 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 ZNF737O75373 536 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 MPZL1O95297 269 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 ZNF83P51522 516 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 FAM74A3Q4VXF1 159 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 TMEM91Q6ZNR0 172 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 CT55Q8WUE5 264 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 NOL4LQ96MY1 436 aaPredicted RBP10.35□□□□□ -0.75
COL9A1-202ENST00000357250 GPX7Q96SL4 187 aaPredicted RBP10.35□□□□□ -0.75
COL9A1-202ENST00000357250 RAB33BQ9H082 229 aa10.35□□□□□ -0.75
COL9A1-202ENST00000357250 H3BMH7 237 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 TMIGD3P0DMS9 266 aaPredicted RBP10.34□□□□□ -0.75
COL9A1-202ENST00000357250 OR3A1P47881 315 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 LSM11P83369 360 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL9A1-202ENST00000357250 FA2HQ7L5A8 372 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 OR2M3Q8NG83 312 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 OR10G4Q8NGN3 311 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 OR10G9Q8NGN4 311 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 OR10G7Q8NGN6 311 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 RBBP6Q7Z6E9 1792 aaKnown RBP10.34□□□□□ -0.75
COL9A1-202ENST00000357250 LINC00862A6NCI5 91 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 TSPAN7P41732 249 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 ACAA2P42765 397 aaKnown RBP10.34□□□□□ -0.75
COL9A1-202ENST00000357250 GALR1P47211 349 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 C9orf62Q8N4C0 152 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 ST6GALNAC2Q9UJ37 374 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 CCDC88CQ9P219 2028 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 RBFOX3A6NFN3 312 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 GNG4P50150 75 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 TMEM267Q0VDI3 215 aaPredicted RBP10.34□□□□□ -0.75
COL9A1-202ENST00000357250 PRR27Q6MZM9 219 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 GVQW1Q8N7I0 195 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 LRFN3Q9BTN0 628 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 SEC11CQ9BY50 192 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 OR2H1Q9GZK4 316 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 Q9N2K0 584 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 NAT8Q9UHE5 227 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 SCO1O75880 301 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 PPYP01298 95 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 RPS4Y1P22090 263 aaKnown RBP10.34□□□□□ -0.75
COL9A1-202ENST00000357250 SPCS3P61009 180 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 ETFDHQ16134 617 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 INO80CQ6PI98 192 aaPredicted RBP10.34□□□□□ -0.75
COL9A1-202ENST00000357250 OR4A4PQ8NGN8 299 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 ANAPC16Q96DE5 110 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 FAM210BQ96KR6 192 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 IFT22Q9H7X7 185 aa10.34□□□□□ -0.75
COL9A1-202ENST00000357250 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 A0A1B0GU03 582 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 B4E171 279 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 FOXS1O43638 330 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 SMIM17P0DL12 118 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 OPRK1P41145 380 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 HIST1H3AP68431 136 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 C1QL3Q5VWW1 255 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 SMRP1Q8NCR6 262 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 RAB1CQ92928 201 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 GRAMD2BQ96HH9 432 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 TMEM38BQ9NVV0 291 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 DXOO77932 396 aaKnown RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 SEC11BP0C7V7 166 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 LIFP15018 202 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 NQO2P16083 231 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 NAAAQ02083 359 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 DPPA3Q6W0C5 159 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 TBC1D26Q86UD7 250 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 MYPOPQ86VE0 399 aaPredicted RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 HOGA1Q86XE5 327 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 BVESQ8NE79 360 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 PPP1R3EQ9H7J1 279 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 SIRT7Q9NRC8 400 aa10.33□□□□□ -0.76
COL9A1-202ENST00000357250 SPTAN1Q13813 2472 aaKnown RBP10.33□□□□□ -0.76
COL9A1-202ENST00000357250 A0A0U1RQV5 110 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms