RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 SSX1Q16384 188 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 MRPL54Q6P161 138 aaKnown RBP14.21□□□□□ -0.13
RXRA-201ENST00000356384 DEGS2Q6QHC5 323 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 RNF165Q6ZSG1 346 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 OR5R1Q8NH85 324 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 RAB1CQ92928 201 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 CYB5R1Q9UHQ9 305 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 KNL1Q8NG31 2342 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 PLPP3O14495 311 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 D2HGDHQ8N465 521 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 SSMEM1Q8WWF3 244 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 NPAS1Q99742 590 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 NEURL2Q9BR09 285 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 F2RL2O00254 374 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 FOXO1Q12778 655 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 IL11RAQ14626 422 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 AWAT1Q58HT5 328 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 TMEM251Q8N6I4 163 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 ISOC2Q96AB3 205 aa14.21□□□□□ -0.13
RXRA-201ENST00000356384 COL4A1P02462 1669 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 AP4M1O00189 453 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 CTLA4P16410 223 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 COL8A1P27658 744 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 XAF1Q6GPH4 301 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 CHAC2Q8WUX2 184 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 ZG16BQ96DA0 208 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 PCED1AQ9H1Q7 454 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 ZNF71Q9NQZ8 489 aaPredicted RBP14.21□□□□□ -0.14
RXRA-201ENST00000356384 VSIG4Q9Y279 399 aa14.21□□□□□ -0.14
RXRA-201ENST00000356384 TMIGD3P0DMS9 266 aaPredicted RBP14.2□□□□□ -0.14
RXRA-201ENST00000356384 SH2D5Q6ZV89 423 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 ZNF770Q6IQ21 691 aaPredicted RBP14.2□□□□□ -0.14
RXRA-201ENST00000356384 TP53I13Q8NBR0 393 aaPredicted RBP14.2□□□□□ -0.14
RXRA-201ENST00000356384 VSTM2AQ8TAG5 236 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 CDRT15L2A8MXV6 281 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 SYNGR2O43760 224 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 STAG3L2P0CL84 134 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 GALP22466 123 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 TRA2AQ13595 282 aaKnown RBP eCLIP14.2□□□□□ -0.14
RXRA-201ENST00000356384 RTP5Q14D33 572 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 SIGIRRQ6IA17 410 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 WDFY2Q96P53 400 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 OR5B21A6NL26 309 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 ZNF205O95201 554 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 DAOP14920 347 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 RIGQ13278 110 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 DPPA3Q6W0C5 159 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 OR2I1PQ8NGU4 316 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 ADTRPQ96IZ2 230 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 PRSS50Q9UI38 385 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 ANKRD20A5PA0PJZ0 165 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 GABRA1P14867 456 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 CEBPDP49716 269 aaPredicted RBP14.2□□□□□ -0.14
RXRA-201ENST00000356384 MEOX2P50222 304 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 C21orf58P58505 322 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 ANAPC16Q96DE5 110 aa14.2□□□□□ -0.14
RXRA-201ENST00000356384 IGSF23A1L1A6 192 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 HSD17B13Q7Z5P4 300 aaPredicted RBP14.19□□□□□ -0.14
RXRA-201ENST00000356384 OR8A1Q8NGG7 326 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 RASL11BQ9BPW5 248 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 TBX21Q9UL17 535 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 UBR3Q6ZT12 1888 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 CHST1O43916 411 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 SKP2Q13309 424 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 SSPNQ14714 243 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 OR10A7Q8NGE5 316 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 OR8B12Q8NGG6 310 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 IL17BQ9UHF5 180 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 TRAV38-1A0A0B4J264 116 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 BRS3P32247 399 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 SELENOPP49908 381 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 RAG2P55895 527 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 WNT3P56703 355 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 MPV17LQ2QL34 196 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 ZNF880Q6PDB4 577 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 THSD4Q6ZMP0 1018 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 SNX22Q96L94 193 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 GABRG3Q99928 467 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 SERGEFQ9UGK8 458 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 PCDHGA9Q9Y5G4 932 aaKnown RBP14.19□□□□□ -0.14
RXRA-201ENST00000356384 A0A087X0M5 115 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 A0A1B0GX30 115 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 TRDCB7Z8K6 153 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 CORTO00230 105 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 CTSDP07339 412 aaPredicted RBP14.19□□□□□ -0.14
RXRA-201ENST00000356384 SUCLG1P53597 346 aaKnown RBP14.19□□□□□ -0.14
RXRA-201ENST00000356384 PNRC1Q12796 327 aaPredicted RBP14.19□□□□□ -0.14
RXRA-201ENST00000356384 STARD10Q9Y365 291 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 DOCK2Q92608 1830 aa14.19□□□□□ -0.14
RXRA-201ENST00000356384 EIF3IQ13347 325 aaKnown RBP14.19□□□□□ -0.14
RXRA-201ENST00000356384 ECM29Q5VYK3 1845 aa14.18□□□□□ -0.14
RXRA-201ENST00000356384 ELOA3CA0A087WX78 387 aaPredicted RBP14.18□□□□□ -0.14
RXRA-201ENST00000356384 CD3EP07766 207 aa14.18□□□□□ -0.14
RXRA-201ENST00000356384 FAM157CP0CG43 387 aa14.18□□□□□ -0.14
RXRA-201ENST00000356384 APELAP0DMC3 54 aa14.18□□□□□ -0.14
RXRA-201ENST00000356384 P2RY1P47900 373 aa14.18□□□□□ -0.14
RXRA-201ENST00000356384 WFDC3Q8IUB2 231 aa14.18□□□□□ -0.14
RXRA-201ENST00000356384 OR10AC1Q8NH08 325 aa14.18□□□□□ -0.14
RXRA-201ENST00000356384 PACRGQ96M98 296 aaPredicted RBP14.18□□□□□ -0.14
RXRA-201ENST00000356384 MOGAT1Q96PD6 335 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms