RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SSBP1Q04837 148 aaKnown RBP12.38□□□□□ -0.43
SREBF1-202ENST00000355815 PABPC1L2AQ5JQF8 200 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 F6UZH7 168 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
SREBF1-202ENST00000355815 CLN5O75503 358 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 LYPD3O95274 346 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 NHLH2Q02577 135 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 WIPI1Q5MNZ9 446 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-202ENST00000355815 THEM4Q5T1C6 240 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 WDR25Q64LD2 544 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-202ENST00000355815 Q6ZN92 141 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 CYB561D1Q8N8Q1 229 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 MCHR2Q969V1 340 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 C12orf49Q9H741 205 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 SIRT7Q9NRC8 400 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 A8MXK9 166 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 ADAM20O43506 726 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 AMTP48728 403 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 EDDM3AQ14507 147 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-202ENST00000355815 CCNL2Q96S94 520 aaPredicted RBP12.38□□□□□ -0.43
SREBF1-202ENST00000355815 FKBP11Q9NYL4 201 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 DNAJB11Q9UBS4 358 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 XIRP2A4UGR9 3374 aa12.38□□□□□ -0.43
SREBF1-202ENST00000355815 LINC01387J3KSC0 135 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 PGA4P0DJD7 388 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 PGA5P0DJD9 388 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 CCL2P13500 99 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 MICBQ29980 383 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 TFAP2EQ6VUC0 442 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 ZNF275Q9NSD4 429 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-202ENST00000355815 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 KRASP01116 189 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 PPP1CBP62140 327 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 CTAG1AP78358 180 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 TMEM241Q24JQ0 296 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 SLC25A42Q86VD7 318 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 VN1R17PQ8TDU5 208 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 RASL10BQ96S79 203 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 PLEKHF2Q9H8W4 249 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 CLEC18AA5D8T8 446 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 C17orf112F2Z3M2 114 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 CER1O95813 267 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 CLN3Q13286 438 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 LYZL2Q7Z4W2 148 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 RABEPKQ7Z6M1 372 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 CLEC18CQ8NCF0 446 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 MAFAQ8NHW3 353 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-202ENST00000355815 SOX7Q9BT81 388 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 INTS1Q8N201 2190 aaKnown RBP12.37□□□□□ -0.43
SREBF1-202ENST00000355815 MAP1LC3B2A6NCE7 125 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 TMEM11P17152 192 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 S100A7P31151 101 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 JMJD6Q6NYC1 403 aaPredicted RBP12.37□□□□□ -0.43
SREBF1-202ENST00000355815 MAP1LC3BQ9GZQ8 125 aa12.37□□□□□ -0.43
SREBF1-202ENST00000355815 GBF1Q92538 1859 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 IGKV1D-43A0A0B4J1Z2 117 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 ECI1P42126 302 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 TPPP2P59282 170 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 MRPL49Q13405 166 aaKnown RBP12.36□□□□□ -0.43
SREBF1-202ENST00000355815 KISS1Q15726 138 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 RHBDD2Q6NTF9 364 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 EXTL1Q92935 676 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 ADIPOR1Q96A54 375 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 OBP2BQ9NPH6 170 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 NAT8BQ9UHF3 227 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 ZNF407Q9C0G0 2248 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 TERTO14746 1132 aaKnown RBP12.36□□□□□ -0.43
SREBF1-202ENST00000355815 GABRA2P47869 451 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 PLAURQ03405 335 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 SPINK9Q5DT21 86 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 D2HGDHQ8N465 521 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 FAM181AQ8N9Y4 354 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 ZNF501Q96CX3 271 aaPredicted RBP12.36□□□□□ -0.43
SREBF1-202ENST00000355815 MRGPRX4Q96LA9 322 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 SLC35D1Q9NTN3 355 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 NOSIPQ9Y314 301 aaKnown RBP12.36□□□□□ -0.43
SREBF1-202ENST00000355815 PRRC2CQ9Y520 2896 aaKnown RBP12.36□□□□□ -0.43
SREBF1-202ENST00000355815 CREBBPQ92793 2442 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 CADP27708 2225 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 UBE2NP61088 152 aaKnown RBP12.36□□□□□ -0.43
SREBF1-202ENST00000355815 OR10A7Q8NGE5 316 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 CPT1CQ8TCG5 803 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 OXGR1Q96P68 337 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 TBX15Q96SF7 602 aa12.36□□□□□ -0.43
SREBF1-202ENST00000355815 LOC102725191A0A1B0GVB3 256 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 NPIPB9F8W1W9 429 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 DHHO43323 396 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 RAMP1O60894 148 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 WISP1O95388 367 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 FBP1P09467 338 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 EIF1P41567 113 aaKnown RBP12.35□□□□□ -0.43
SREBF1-202ENST00000355815 TCL1AP56279 114 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 CATR1Q13166 79 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 BSXQ3C1V8 233 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 CADM4Q8NFZ8 388 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 OR5B3Q8NH48 314 aa12.35□□□□□ -0.43
SREBF1-202ENST00000355815 PINX1Q96BK5 328 aaKnown RBP12.35□□□□□ -0.43
SREBF1-202ENST00000355815 CDH20Q9HBT6 801 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms