RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 TMEM56Q96MV1 263 aa15.72■□□□□ 0.11
SPNS3-201ENST00000355530 IFT22Q9H7X7 185 aa15.72■□□□□ 0.11
SPNS3-201ENST00000355530 P4HTMQ9NXG6 502 aa15.72■□□□□ 0.11
SPNS3-201ENST00000355530 TMEM56-RWDD3S4R434 201 aa15.72■□□□□ 0.11
SPNS3-201ENST00000355530 CCDC163A0A0D9SF12 145 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 NKX2-6A6NCS4 301 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 CYTIPO60759 359 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 RFPL3SP0C7P2 107 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 HOXB1P14653 301 aaPredicted RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 NKX2-1P43699 371 aaPredicted RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 RND3P61587 244 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 TMEM182Q6ZP80 229 aaPredicted RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 ZNF561Q8N587 486 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 OR1J1Q8NGS3 322 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 FAM213BQ8TBF2 198 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 CPNE4Q96A23 557 aaPredicted RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 SMDT1Q9H4I9 107 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 KCNJ16Q9NPI9 418 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 SDK2Q58EX2 2172 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 ZNF587BE7ETH6 402 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 EIF3GO75821 320 aaKnown RBP eCLIP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 GNRHRP30968 328 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 DUSP3P51452 185 aaPredicted RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 CLDN15P56746 228 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 WIPI1Q5MNZ9 446 aaPredicted RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 WDR5BQ86VZ2 330 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 TMEM45BQ96B21 275 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 USB1Q9BQ65 265 aaKnown RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 UBE2J1Q9Y385 318 aaPredicted RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 MRPS18CQ9Y3D5 142 aaKnown RBP15.71■□□□□ 0.11
SPNS3-201ENST00000355530 SHANK1Q9Y566 2161 aa15.71■□□□□ 0.11
SPNS3-201ENST00000355530 C5orf52A6NGY3 159 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 TK1P04183 234 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 AGAP20933 346 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 NPBWR2P48146 333 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 SNRPEP62304 92 aaKnown RBP15.7■□□□□ 0.1
SPNS3-201ENST00000355530 COLCA1Q6ZS62 124 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 TBC1D26Q86UD7 250 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 ZNF695Q8IW36 515 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 OR8G5Q8NG78 346 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 IP6K3Q96PC2 410 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 SLC7A10Q9NS82 523 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 DUXBA0A1W2PPF3 345 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 TRAPPC6AO75865 159 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 S100A8P05109 93 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 S100A6P06703 90 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 B2MP61769 119 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.7■□□□□ 0.1
SPNS3-201ENST00000355530 PPP1R32Q7Z5V6 425 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 SAXO1Q8IYX7 474 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 ZNF565Q8N9K5 539 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 ABHD3Q8WU67 409 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 HLA-CQ95604 372 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 PAPOLGQ9BWT3 736 aaKnown RBP15.7■□□□□ 0.1
SPNS3-201ENST00000355530 SLC25A31Q9H0C2 315 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 LYRM2Q9NU23 88 aaPredicted RBP15.7■□□□□ 0.1
SPNS3-201ENST00000355530 FBXO7Q9Y3I1 522 aa15.7■□□□□ 0.1
SPNS3-201ENST00000355530 A0A1W2PPH5 198 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 IGSF23A1L1A6 192 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 A6NLC8 198 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 PRSS44E7EML9 344 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 UBE2CO00762 179 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 SMIM6P0DI80 62 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 HOXA6P31267 233 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 PPP1CCP36873 323 aaKnown RBP15.69■□□□□ 0.1
SPNS3-201ENST00000355530 NOVA1P51513 510 aaKnown RBP15.69■□□□□ 0.1
SPNS3-201ENST00000355530 EIF2S3LQ2VIR3 472 aaKnown RBP15.69■□□□□ 0.1
SPNS3-201ENST00000355530 CPEB3Q8NE35 698 aaKnown RBP15.69■□□□□ 0.1
SPNS3-201ENST00000355530 IER2Q9BTL4 223 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 PLEKHF2Q9H8W4 249 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 Q9N2K0 584 aa15.69■□□□□ 0.1
SPNS3-201ENST00000355530 FAM24AA6NFZ4 105 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 NAPSAO96009 420 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 SULT1A1P50225 295 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 Q0VFX4 171 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 FOXO1Q12778 655 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 CLINT1Q14677 625 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 SPIN3Q5JUX0 258 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 CD300LFQ8TDQ1 290 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 C20orf24Q9BUV8 137 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 SSSCA1O60232 199 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 ACAA1P09110 424 aaPredicted RBP15.68■□□□□ 0.1
SPNS3-201ENST00000355530 RAB5AP20339 215 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 BCL3P20749 454 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 GDF1P27539 372 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 OTX2P32243 289 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 FGF12P61328 243 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 POLR2GP62487 172 aaKnown RBP eCLIP15.68■□□□□ 0.1
SPNS3-201ENST00000355530 RAB1AP62820 205 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 KRBOX4Q5JUW0 171 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 SELENOHQ8IZQ5 122 aaKnown RBP15.68■□□□□ 0.1
SPNS3-201ENST00000355530 SUMF1Q8NBK3 374 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 OR56B2PQ8NGI1 322 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 OR2G3Q8NGZ4 309 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 ISOC2Q96AB3 205 aa15.68■□□□□ 0.1
SPNS3-201ENST00000355530 ZNF845Q96IR2 970 aaPredicted RBP15.68■□□□□ 0.1
SPNS3-201ENST00000355530 CLEC18AA5D8T8 446 aa15.67■□□□□ 0.1
SPNS3-201ENST00000355530 BTBD17A6NE02 478 aa15.67■□□□□ 0.1
SPNS3-201ENST00000355530 ZNF14P17017 642 aaPredicted RBP15.67■□□□□ 0.1
SPNS3-201ENST00000355530 ATP6V0CP27449 155 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms