RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 KIR2DS1Q14954 304 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 WDR82Q6UXN9 313 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 OR11H4Q8NGC9 324 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 DACT3Q96B18 629 aaPredicted RBP14.56□□□□□ -0.08
VPS13B-201ENST00000355155 PIK3IP1Q96FE7 263 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 LIME1Q9H400 295 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 HMSDA8MTL9 139 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 TRDCB7Z8K6 153 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 TUSC2O75896 110 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 HLA-AP01891 365 aaKnown RBP14.56□□□□□ -0.08
VPS13B-201ENST00000355155 CD34P28906 385 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 SUPT4H1P63272 117 aaKnown RBP14.56□□□□□ -0.08
VPS13B-201ENST00000355155 C22orf34Q6ZV56 151 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 TMED4Q7Z7H5 227 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 ZNF488Q96MN9 340 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 ESPL1Q14674 2120 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 EEF1E1-BLOC1S5C9J1V9 151 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 F5H5P2 479 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 ASCL1P50553 236 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 FIP1L1Q6UN15 594 aaKnown RBP14.56□□□□□ -0.08
VPS13B-201ENST00000355155 ZNF497Q6ZNH5 498 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 MAFIPQ8WZ33 124 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 DYRK2Q92630 601 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 PHB2Q99623 299 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 RSRP1Q9BUV0 290 aa14.56□□□□□ -0.08
VPS13B-201ENST00000355155 MBNL3Q9NUK0 354 aaKnown RBP14.56□□□□□ -0.08
VPS13B-201ENST00000355155 CUL9Q8IWT3 2517 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 CFAP47Q6ZTR5 3102 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 CDIPTO14735 213 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 DNASE1P24855 282 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 KLF3P57682 345 aaPredicted RBP14.55□□□□□ -0.08
VPS13B-201ENST00000355155 SLC22A25Q6T423 547 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 TMEM108Q6UXF1 575 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 ACP7Q6ZNF0 438 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 C17orf107Q6ZR85 190 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 UXS1Q8NBZ7 420 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 ZCCHC14Q8WYQ9 949 aaKnown RBP14.55□□□□□ -0.08
VPS13B-201ENST00000355155 ZNF2Q9BSG1 426 aaPredicted RBP14.55□□□□□ -0.08
VPS13B-201ENST00000355155 SLC23A1Q9UHI7 598 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 PLSCR5A0PG75 271 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 SDCBPO00560 298 aaPredicted RBP14.55□□□□□ -0.08
VPS13B-201ENST00000355155 SH2D1BO14796 132 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 DEGS1O15121 323 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 NPY4RP50391 375 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 IL13RA1P78552 427 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 LILRB1Q8NHL6 650 aaPredicted RBP14.55□□□□□ -0.08
VPS13B-201ENST00000355155 MRPL24Q96A35 216 aaKnown RBP14.55□□□□□ -0.08
VPS13B-201ENST00000355155 TOLLIPQ9H0E2 274 aa14.55□□□□□ -0.08
VPS13B-201ENST00000355155 CRYM-AS1A6NIL9 109 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 SMLR1H3BR10 107 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 OR2H2O95918 312 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 RND3P61587 244 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 Q5BKY6 102 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 OR4A4PQ8NGN8 299 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 GALNT14Q96FL9 552 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 APC2O95996 2303 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 SLC22A5O76082 557 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 CD55P08174 381 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 FABP6P51161 128 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 CASP6P55212 293 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 OR2T35Q8NGX2 323 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 ERGIC1Q969X5 290 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 TMEM165Q9HC07 324 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 RAB18Q9NP72 206 aa14.54□□□□□ -0.08
VPS13B-201ENST00000355155 CHD3Q12873 2000 aaKnown RBP14.54□□□□□ -0.08
VPS13B-201ENST00000355155 GOSR2O14653 212 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 LHBP01229 141 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 PDCD1Q15116 288 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 BRICD5Q6PL45 260 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 SLC38A6Q8IZM9 456 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 Q8TCH9 128 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 WDR13Q9H1Z4 485 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 GLS2Q9UI32 602 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 PCDHB10Q9UN67 800 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 SRRM5B3KS81 715 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 HLA-DRB3P79483 266 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 LRTM2Q8N967 370 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 DIRC2Q96SL1 478 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 NCOR1P1Q9H4R4 102 aa14.53□□□□□ -0.08
VPS13B-201ENST00000355155 C14orf166Q9Y224 244 aaKnown RBP14.53□□□□□ -0.08
VPS13B-201ENST00000355155 SLC25A4P12235 298 aa14.52□□□□□ -0.08
VPS13B-201ENST00000355155 DCAF12L2Q5VW00 463 aa14.52□□□□□ -0.08
VPS13B-201ENST00000355155 SLC35E4Q6ICL7 350 aa14.52□□□□□ -0.08
VPS13B-201ENST00000355155 TMEM65Q6PI78 240 aa14.52□□□□□ -0.08
VPS13B-201ENST00000355155 CLEC18BQ6UXF7 455 aa14.52□□□□□ -0.08
VPS13B-201ENST00000355155 LRP11Q86VZ4 500 aa14.52□□□□□ -0.08
VPS13B-201ENST00000355155 FAM185AQ8N0U4 392 aa14.52□□□□□ -0.08
VPS13B-201ENST00000355155 ZDHHC8Q9ULC8 765 aa14.52□□□□□ -0.08
VPS13B-201ENST00000355155 DPRXA6NFQ7 191 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 ZSCAN5BA6NJL1 495 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 NXPH2O95156 264 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 HAND1O96004 215 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 GLP1RP43220 463 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 HMGN3Q15651 99 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 IGFBP7Q16270 282 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 PCSK4Q6UW60 755 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 LDLRAD3Q86YD5 345 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 FAM222BQ8WU58 562 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 MEGF10Q96KG7 1140 aa14.52□□□□□ -0.09
VPS13B-201ENST00000355155 CLEC4MQ9H2X3 399 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms