RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 LRRC30A6NM36 301 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 IFNL4K9M1U5 179 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 RAB3DO95716 219 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 CYB5R3P00387 301 aaPredicted RBP13.11□□□□□ -0.31
CTSA-202ENST00000354880 CD74P04233 296 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 DANCRP0C864 163 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 CEBPDP49716 269 aaPredicted RBP13.11□□□□□ -0.31
CTSA-202ENST00000354880 PAN3Q58A45 887 aaKnown RBP13.11□□□□□ -0.31
CTSA-202ENST00000354880 TGIF2LYQ8IUE0 185 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 BEST4Q8NFU0 473 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 MAFIPQ8WZ33 124 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 VRK1Q99986 396 aaPredicted RBP13.11□□□□□ -0.31
CTSA-202ENST00000354880 SPOCK3Q9BQ16 436 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 CHST6Q9GZX3 395 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 WIPI2Q9Y4P8 454 aa13.11□□□□□ -0.31
CTSA-202ENST00000354880 UTP20O75691 2785 aaKnown RBP13.1□□□□□ -0.31
CTSA-202ENST00000354880 FAM221AA4D161 298 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 OR2AT4A6NND4 320 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 CD8AP01732 235 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 SOD3P08294 240 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 FCGR3AP08637 254 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 PSG2P11465 335 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 TBPP20226 339 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 LMO1P25800 156 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 GIFP27352 417 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 PLA1AQ53H76 456 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 C11orf71Q6IPW1 123 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 PLET1Q6UQ28 207 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 DTX2Q86UW9 622 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 OR5T2Q8NGG2 359 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 CACNG6Q9BXT2 260 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 TINAGL1Q9GZM7 467 aaPredicted RBP13.1□□□□□ -0.31
CTSA-202ENST00000354880 DPAGT1Q9H3H5 408 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 ETAA1Q9NY74 926 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 EDARQ9UNE0 448 aa13.1□□□□□ -0.31
CTSA-202ENST00000354880 M0QYG6 137 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 AMY2BP19961 511 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 HRH1P35367 487 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 CCR6P51684 374 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 RNASE10Q5GAN6 216 aaKnown RBP13.09□□□□□ -0.31
CTSA-202ENST00000354880 FAM201AQ5SY85 155 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 SFRP4Q6FHJ7 346 aaPredicted RBP13.09□□□□□ -0.31
CTSA-202ENST00000354880 GLCCI1Q86VQ1 547 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 C1orf87Q8N0U7 546 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 OR4K15Q8NH41 348 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 OR56B4Q8NH76 319 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 MMP28Q9H239 520 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 CHMP1AQ9HD42 196 aaPredicted RBP13.09□□□□□ -0.31
CTSA-202ENST00000354880 IGKV1D-17A0A075B6S4 117 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 IGHV3OR15-7A0A075B7D8 119 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 PSPNO60542 156 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 NAPSAO96009 420 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 HPXP02790 462 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 PRDX2P32119 198 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 CD80P33681 288 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 MDH2P40926 338 aaKnown RBP13.09□□□□□ -0.31
CTSA-202ENST00000354880 MEF2DQ14814 521 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 MICBQ29980 383 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 SHEQ5VZ18 495 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 ZNF782Q6ZMW2 699 aaPredicted RBP13.09□□□□□ -0.31
CTSA-202ENST00000354880 CCL17Q92583 94 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 PPA2Q9H2U2 334 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 RIMS4Q9H426 269 aaPredicted RBP13.09□□□□□ -0.31
CTSA-202ENST00000354880 UBTD1Q9HAC8 227 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 SEBOXQ9HB31 216 aaPredicted RBP13.09□□□□□ -0.31
CTSA-202ENST00000354880 DCAF16Q9NXF7 216 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 COPZ2Q9P299 210 aa13.09□□□□□ -0.31
CTSA-202ENST00000354880 IGHV1-69-2A0A0G2JMI3 117 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 AMY2AP04746 511 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 TAS2R46P59540 309 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 COL10A1Q03692 680 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 ACTBL2Q562R1 376 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 CD177Q8N6Q3 437 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 OR51S1Q8NGJ8 323 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 TRAF4Q9BUZ4 470 aaPredicted RBP13.08□□□□□ -0.32
CTSA-202ENST00000354880 RAB1BQ9H0U4 201 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 TMEM165Q9HC07 324 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 TMEM106BQ9NUM4 274 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 LAMP3Q9UQV4 416 aa13.08□□□□□ -0.32
CTSA-202ENST00000354880 TANC2Q9HCD6 1990 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 hCG_2014768A0A024R1R8 64 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 IGKV1D-8A0A087WSZ0 117 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 OOEPA6NGQ2 149 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 TMEM178BH3BS89 294 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 ZNF205O95201 554 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 PMP2P02689 132 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 TFF1P04155 84 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 TCRBP04435 133 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 MUC1P15941 1255 aaPredicted RBP13.07□□□□□ -0.32
CTSA-202ENST00000354880 GABRA2P47869 451 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 TEX36Q5VZQ5 186 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 Q6ZPA2 131 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 OR5AP2Q8NGF4 316 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 OR5H2Q8NGV7 314 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 ANGPTL6Q8NI99 470 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 ZNF286AQ9HBT8 521 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 METRNQ9UJH8 293 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 ZNF222Q9UK12 451 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 CRYBG3Q68DQ2 2970 aa13.07□□□□□ -0.32
CTSA-202ENST00000354880 DISC1C4P0D8 188 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms