RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SUMF1Q8NBK3 374 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 GTF3AQ92664 365 aaKnown RBP19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 ZNF629Q9UEG4 869 aaPredicted RBP19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 FBXL17Q9UF56 701 aa19.1■□□□□ 0.65
NKX2-1-201ENST00000354822 KIR2DS1A0A191URI9 304 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 KIR2DS4P43632 304 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 CLN3Q13286 438 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 IL13RA2Q14627 380 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 KIR2DS1Q14954 304 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 IGSF11Q5DX21 431 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 ZNF573Q86YE8 665 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 UBAC2Q8NBM4 344 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 OR5P3Q8WZ94 311 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 TSNAXQ99598 290 aaKnown RBP19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 OR5B21A6NL26 309 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 ABCD4O14678 606 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 FBXW9Q5XUX1 488 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 OR1K1Q8NGR3 316 aa19.09■□□□□ 0.65
NKX2-1-201ENST00000354822 C3orf85A0A1B0GTC6 90 aa19.08■□□□□ 0.65
NKX2-1-201ENST00000354822 RND3P61587 244 aa19.08■□□□□ 0.65
NKX2-1-201ENST00000354822 C10orf91Q5T1B1 145 aa19.08■□□□□ 0.65
NKX2-1-201ENST00000354822 BATF2Q8N1L9 274 aa19.08■□□□□ 0.65
NKX2-1-201ENST00000354822 OR11L1Q8NGX0 322 aa19.08■□□□□ 0.65
NKX2-1-201ENST00000354822 ZNF552Q9H707 407 aaPredicted RBP19.08■□□□□ 0.65
NKX2-1-201ENST00000354822 CRIM1Q9NZV1 1036 aa19.08■□□□□ 0.65
NKX2-1-201ENST00000354822 DNASE2O00115 360 aaPredicted RBP19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 ST8SIA3O43173 380 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 GPR137BO60478 399 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 P2RY1P47900 373 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 C3AR1Q16581 482 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 SMUG1Q53HV7 270 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 FBXW12Q6X9E4 464 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 PIP4P1Q86T03 277 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 LDLRAD3Q86YD5 345 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 WDYHV1Q96HA8 205 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 PRSS50Q9UI38 385 aa19.08■□□□□ 0.64
NKX2-1-201ENST00000354822 KNTC1P50748 2209 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 TRDCB7Z8K6 153 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 GLAP06280 429 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 GNRHRP30968 328 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 KCNJ3P48549 501 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 GNG3P63215 75 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 ZNF565Q8N9K5 539 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 OR4A4PQ8NGN8 299 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 BCL2L2Q92843 193 aaPredicted RBP19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 PARP11Q9NR21 331 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 MUC3AQ02505 3323 aa19.07■□□□□ 0.64
NKX2-1-201ENST00000354822 TRGV5A0A0B4J1U4 118 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 MED6O75586 246 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 CDS2O95674 445 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 CAV2P51636 162 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 SPAG16Q8N0X2 631 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 TMEM178AQ8NBL3 297 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 TMEM222Q9H0R3 208 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 DEFB127Q9H1M4 99 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 HRH4Q9H3N8 390 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 CARHSP1Q9Y2V2 147 aaKnown RBP19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 LIPGQ9Y5X9 500 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 ATP23Q9Y6H3 246 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 BORCS7-ASMTA0A0B4J1R7 106 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 IL18BPO95998 194 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 RCC1P18754 421 aaPredicted RBP19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 ARHGDIBP52566 201 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 NEK7Q8TDX7 302 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 TP53RKQ96S44 253 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 ARV1Q9H2C2 271 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 C12orf49Q9H741 205 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 RHOFQ9HBH0 211 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 TREM1Q9NP99 234 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 ZNF175Q9Y473 711 aa19.06■□□□□ 0.64
NKX2-1-201ENST00000354822 SLC22A20A6NK97 555 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 F8W036 122 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 J3QW42 95 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 SIGLEC5O15389 551 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 NUPL2O15504 423 aaKnown RBP19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 AKR1C2P52895 323 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 SOX8P57073 446 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 ARG2P78540 354 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 AKR1C1Q04828 323 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 IL24Q13007 206 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 ZNF766Q5HY98 468 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 HAGHLQ6PII5 290 aaPredicted RBP19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 TMEM56Q96MV1 263 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 SEC11CQ9BY50 192 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 PKIBQ9C010 78 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 TMEM56-RWDD3S4R434 201 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 TRBV6-6A0A0A6YYG2 114 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 GPR31O00270 319 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 PRKACAP17612 351 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 WNT5AP41221 380 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 GNMTQ14749 295 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 HIKESHIQ53FT3 197 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 SLC35G3Q8N808 338 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 HS3ST6Q96QI5 342 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 FAM212BQ9NTI7 297 aaPredicted RBP19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 UQCC1Q9NVA1 299 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 POMT1Q9Y6A1 747 aa19.05■□□□□ 0.64
NKX2-1-201ENST00000354822 SHANK1Q9Y566 2161 aa19.04■□□□□ 0.64
NKX2-1-201ENST00000354822 PCNX2A6NKB5 2137 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms