RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SDF2L1Q9HCN8 221 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 TUBG2Q9NRH3 451 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 PRSS50Q9UI38 385 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 VAX2Q9UIW0 290 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 NAGKQ9UJ70 344 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 PAM16Q9Y3D7 125 aa6.65□□□□□ -1.34
BRCA1-201ENST00000352993 APODP05090 189 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 GUSBP08236 651 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 IRF2P14316 349 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM267Q0VDI3 215 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-201ENST00000352993 FAM90A2PQ658T7 463 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF774Q6NX45 483 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 WDFY1Q8IWB7 410 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 CARFQ8N187 725 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 TP53RKQ96S44 253 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 DIRC2Q96SL1 478 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 GLRX2Q9NS18 164 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 PIGLQ9Y2B2 252 aa6.65□□□□□ -1.35
BRCA1-201ENST00000352993 A0A1W2PR80 420 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 SHISA7A6NL88 538 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 MS4A18H0YCH9 400 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 M0QZK8 103 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 CHST1O43916 411 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 GGCTO75223 188 aaKnown RBP6.64□□□□□ -1.35
BRCA1-201ENST00000352993 TRAPPC6AO75865 159 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 OR2J2O76002 312 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 HPRT1P00492 218 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 IFNA1P01562 189 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 CCKARP32238 428 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 RND2P52198 227 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 HNRNPKP61978 463 aaKnown RBP eCLIP6.64□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF92Q03936 586 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 TRA2AQ13595 282 aaKnown RBP eCLIP6.64□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM241Q24JQ0 296 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 MS4A18Q3C1V0 323 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 BSXQ3C1V8 233 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 RCC1LQ96I51 464 aaKnown RBP6.64□□□□□ -1.35
BRCA1-201ENST00000352993 SLC46A1Q96NT5 459 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF442Q9H7R0 627 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 PATZ1Q9HBE1 687 aaKnown RBP6.64□□□□□ -1.35
BRCA1-201ENST00000352993 P4HTMQ9NXG6 502 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 PLA2G3Q9NZ20 509 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 A0A0U1RQK1 487 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 C3orf85A0A1B0GTC6 90 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 B4DGG1 531 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 PROB1E7EW31 1015 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 DDAH2O95865 285 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 CCL5P13501 91 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 CTSEP14091 401 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 RNF151Q2KHN1 245 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM41BQ5BJD5 291 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 DCAF10Q5QP82 559 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 SLC25A26Q70HW3 274 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 MRPL43Q8N983 215 aaKnown RBP6.64□□□□□ -1.35
BRCA1-201ENST00000352993 SLC37A2Q8TED4 501 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 TMEM234Q8WY98 164 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 CTDSP1Q9GZU7 261 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 OR51I2Q9H344 312 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 CDH20Q9HBT6 801 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF581Q9P0T4 197 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 CEACAM1P13688 526 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 ANOS1P23352 680 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 LMO1P25800 156 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 OR10J1P30954 320 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 CHRNA7P36544 502 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 HSD17B7P56937 341 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 GNB2P62879 340 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 MFAP5Q13361 173 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 PRSS8Q16651 343 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 MYPOPQ86VE0 399 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF100Q8IYN0 542 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 C11orf42Q8N5U0 333 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 NEK7Q8TDX7 302 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 NAT6Q93015 286 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 C18orf12Q96KH6 178 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 DEFB118Q96PH6 123 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 KCNK17Q96T54 332 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF286AQ9HBT8 521 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 RPRMQ9NS64 109 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 UNC13CQ8NB66 2214 aa6.64□□□□□ -1.35
BRCA1-201ENST00000352993 A0A1B0GUS0 222 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 C5orf63A6NC05 138 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 PAX1P15863 534 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 SELEP16581 610 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 AADACP22760 399 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 ZNF133P52736 654 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 FAM3BP58499 235 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 HHEXQ03014 270 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 C16orf47Q6ZP98 133 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 SSX7Q7RTT5 188 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 FAM89BQ8N5H3 189 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 OR8G5Q8NG78 346 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 PTPMT1Q8WUK0 201 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 MSI2Q96DH6 328 aaKnown RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 ACY3Q96HD9 319 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 MOB1AQ9H8S9 216 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 AURKAIP1Q9NWT8 199 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 NAT8Q9UHE5 227 aa6.63□□□□□ -1.35
BRCA1-201ENST00000352993 POLR3KQ9Y2Y1 108 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-201ENST00000352993 LHFPL6Q9Y693 200 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms