RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 EDDM3AQ14507 147 aa10.63□□□□□ -0.71
SMAD9-201ENST00000350148 OR4D6Q8NGJ1 314 aa10.63□□□□□ -0.71
SMAD9-201ENST00000350148 HINT2Q9BX68 163 aa10.63□□□□□ -0.71
SMAD9-201ENST00000350148 ARV1Q9H2C2 271 aa10.63□□□□□ -0.71
SMAD9-201ENST00000350148 PLEKHA3Q9HB20 300 aa10.63□□□□□ -0.71
SMAD9-201ENST00000350148 HSD17B6O14756 317 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 HBE1P02100 147 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 PRF1P14222 555 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 CXCL3P19876 107 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 FAM74A1Q5RGS3 127 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 ZNF385CQ66K41 422 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-201ENST00000350148 SLC36A1Q7Z2H8 476 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 MTURNQ8N3F0 131 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 C9orf62Q8N4C0 152 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 OR51A4Q8NGJ6 313 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 OR1K1Q8NGR3 316 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 OR13C8Q8NGS7 320 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 DIRC2Q96SL1 478 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 S1PR3Q99500 378 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 SRXN1Q9BYN0 137 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 PLA2G10O15496 165 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 NKX2-1P43699 371 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-201ENST00000350148 SEC22AQ96IW7 307 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 RAB18Q9NP72 206 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 ZMIZ1Q9ULJ6 1067 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 OR5I1Q13606 314 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 IL13RA2Q14627 380 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 PLGLAQ15195 96 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 SPATA46Q5T0L3 261 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 GGNBP1Q5YKI7 109 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 SAXO1Q8IYX7 474 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 COMMD1Q8N668 190 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 SIGLECL1Q8N7X8 197 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 RTN4IP1Q8WWV3 396 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-201ENST00000350148 UMAD1C9J7I0 102 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 PATE4P0C8F1 98 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 BMP5P22003 454 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 AADACP22760 399 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 EFNB1P98172 346 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 C3AR1Q16581 482 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 LRRTM1Q86UE6 522 aa10.62□□□□□ -0.71
SMAD9-201ENST00000350148 ADAT3Q96EY9 351 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-201ENST00000350148 SDHCQ99643 169 aaPredicted RBP10.62□□□□□ -0.71
SMAD9-201ENST00000350148 THADAQ6YHU6 1953 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 TRGV10A0A0A0MS01 117 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 PYCARD-AS1I3L0S3 204 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 ZNF708P17019 499 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 NDUFB7P17568 137 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 GPR12P47775 334 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 KLF9Q13886 244 aaPredicted RBP10.61□□□□□ -0.71
SMAD9-201ENST00000350148 ZNF124Q15973 351 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 SFRP5Q5T4F7 317 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 MDP1Q86V88 176 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 KCNRGQ8N5I3 272 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 OR10AC1Q8NH08 325 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 FAM213BQ8TBF2 198 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 G6PC2Q9NQR9 355 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 CA10Q9NS85 328 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 E5RGE8 158 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 OR2Z1Q8NG97 314 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 H1FXQ92522 213 aaKnown RBP10.61□□□□□ -0.71
SMAD9-201ENST00000350148 SFXN3Q9BWM7 321 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 NSG2Q9Y328 171 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 NOTCH4Q99466 2003 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 SEC16AO15027 2179 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 AP4M1O00189 453 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 SDCBPO00560 298 aaPredicted RBP10.61□□□□□ -0.71
SMAD9-201ENST00000350148 VSIG8P0DPA2 414 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 TOMM20LQ6UXN7 152 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 RFLNBQ8N5W9 214 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 C16orf97H3BN30 126 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 SFT2D2O95562 160 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 RAB5AP20339 215 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 CTSSP25774 331 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 PIGPP57054 158 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 ABHD5Q8WTS1 349 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 CIB3Q96Q77 187 aaPredicted RBP10.61□□□□□ -0.71
SMAD9-201ENST00000350148 TMEM231Q9H6L2 316 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 ABCA7Q8IZY2 2146 aa10.61□□□□□ -0.71
SMAD9-201ENST00000350148 TNFSF12O43508 249 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 CLN5O75503 358 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 POLR2GP62487 172 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMAD9-201ENST00000350148 TMEM183BQ1AE95 376 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 MICBQ29980 383 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 C1orf162Q8NEQ5 155 aaPredicted RBP10.6□□□□□ -0.71
SMAD9-201ENST00000350148 OR1S2Q8NGQ3 325 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 AKIRIN1Q9H9L7 192 aaPredicted RBP10.6□□□□□ -0.71
SMAD9-201ENST00000350148 CCDC88CQ9P219 2028 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 H0Y8G0 127 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 SIAH2O43255 324 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 CTSDP07339 412 aaPredicted RBP10.6□□□□□ -0.71
SMAD9-201ENST00000350148 CD3EP07766 207 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 RPL13AP40429 203 aaKnown RBP10.6□□□□□ -0.71
SMAD9-201ENST00000350148 B2MP61769 119 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 H2BFWTQ7Z2G1 175 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 ARL2-SNX15V9GYD0 113 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 DOCK8Q8NF50 2099 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 OR5H14A6NHG9 310 aa10.6□□□□□ -0.71
SMAD9-201ENST00000350148 MPPED1O15442 326 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms