RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 TRMT12Q53H54 448 aaKnown RBP9.28□□□□□ -0.92
CAPN3-203ENST00000349748 FFAR4Q5NUL3 377 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 TCEAL8Q8IYN2 117 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 OR4B1Q8NGF8 309 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 OR14C36Q8NHC7 312 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 IMMP2LQ96T52 175 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 ATP5SQ99766 215 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 RBM24Q9BX46 236 aaKnown RBP9.28□□□□□ -0.92
CAPN3-203ENST00000349748 BANF2Q9H503 90 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 LYRM2Q9NU23 88 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-203ENST00000349748 ADAM29Q9UKF5 820 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 HCFC2Q9Y5Z7 792 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 REV3LO60673 3130 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 OBSL1O75147 1896 aa9.28□□□□□ -0.92
CAPN3-203ENST00000349748 A0A1W2PP11 408 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 NPIPA2E9PIF3 369 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 CST7O76096 145 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 HIST1H1TP22492 207 aaPredicted RBP9.27□□□□□ -0.92
CAPN3-203ENST00000349748 ARFRP1Q13795 201 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 CISD2Q8N5K1 135 aaKnown RBP9.27□□□□□ -0.92
CAPN3-203ENST00000349748 SUMF1Q8NBK3 374 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 STARD4Q96DR4 205 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 IL21Q9HBE4 155 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 FBXL7Q9UJT9 491 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 COLQQ9Y215 455 aaPredicted RBP9.27□□□□□ -0.92
CAPN3-203ENST00000349748 SELENOKQ9Y6D0 94 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 COL6A3P12111 3177 aa9.27□□□□□ -0.92
CAPN3-203ENST00000349748 OR5B21A6NL26 309 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF891A8MT65 544 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 GNG7O60262 68 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 SEMA4FO95754 770 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 SNU13P55769 128 aaKnown RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 CTXN1P60606 82 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 RPL23P62829 140 aaKnown RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 QRFPP83859 136 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF266Q14584 549 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 ITPRIPL2Q3MIP1 535 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 LILRA6Q6PI73 481 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 SULF2Q8IWU5 870 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 OR52R1Q8NGF1 315 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 ZC2HC1AQ96GY0 325 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 SLC46A1Q96NT5 459 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 OR51I2Q9H344 312 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 MKKSQ9NPJ1 570 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 LTBP2Q14767 1821 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 TCF20Q9UGU0 1960 aaKnown RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 LOC107986453A0A1B0GWG9 222 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 GPR89AB7ZAQ6 455 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 DIRC3C9JPN6 131 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 F2Z2F3 143 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 SERF1AO75920 110 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 MPIG6BO95866 241 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 PDGFBP01127 241 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 GPR89BP0CG08 455 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 CT45A8P0DMV1 189 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 CT45A9P0DMV2 189 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 IL3RAP26951 378 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 APOBEC3AP31941 199 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 SFTPDP35247 375 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 GRK6P43250 576 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 TRA2BP62995 288 aaKnown RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 MRPS34P82930 218 aaKnown RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 TLE3Q04726 772 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 PRDX4Q13162 271 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 CT45A2Q5DJT8 189 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 LYPD6Q86Y78 171 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 TDHQ8IZJ6 230 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 OR5C1Q8NGR4 320 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 SARAFQ96BY9 339 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 ARHGAP5-AS1Q96IT6 56 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 LMLNQ96KR4 655 aa9.27□□□□□ -0.93
CAPN3-203ENST00000349748 CISD1Q9NZ45 108 aaKnown RBP9.27□□□□□ -0.93
CAPN3-203ENST00000349748 KIAA2026Q5HYC2 2103 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 A0A0U1RQK1 487 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 ST8SIA3O43173 380 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 HBE1P02100 147 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 TSPOP30536 169 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 PLA2G5P39877 138 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 RPL15P61313 204 aaKnown RBP9.26□□□□□ -0.93
CAPN3-203ENST00000349748 C1orf174Q8IYL3 243 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 ATOH7Q8N100 152 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 LGI3Q8N145 548 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 Q8N976 141 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 OR5AU1Q8NGC0 362 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 OTOSQ8NHW6 89 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 PSMF1Q92530 271 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 NAT8Q9UHE5 227 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 EMC9Q9Y3B6 208 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 MEGF11A6BM72 1044 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 PRRT4C9JH25 899 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 G3V3Y1 287 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 CORTO00230 105 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 FSTP19883 344 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 ADMP35318 185 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 ZNF93P35789 620 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-203ENST00000349748 CCR2P41597 374 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 LGALS7P47929 136 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 BLKP51451 505 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 TMEM50BP56557 158 aa9.26□□□□□ -0.93
CAPN3-203ENST00000349748 RHOGP84095 191 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms