RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PLPPR1Q8TBJ4 325 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 CPT1CQ8TCG5 803 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 SPTSSAQ969W0 71 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 THOC3Q96J01 351 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 AKR1E2Q96JD6 320 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 TSNAXQ99598 290 aaKnown RBP5.18□□□□□ -1.58
CLCN3-201ENST00000347613 MAGT1Q9H0U3 335 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 METTL9Q9H1A3 318 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 PRSS50Q9UI38 385 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 LOXL2Q9Y4K0 774 aa5.18□□□□□ -1.58
CLCN3-201ENST00000347613 NKX2-6A6NCS4 301 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 CYTIPO60759 359 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 VAMP5O95183 116 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 IGLV2-14P01704 120 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 CELA3BP08861 270 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 SFTA3P0C7M3 94 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 LMO1P25800 156 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 WNT5AP41221 380 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 F2RL1P55085 397 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 TAS2R46P59540 309 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 NAAAQ02083 359 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 ALKBH6Q3KRA9 238 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 SPATA46Q5T0L3 261 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 PLCXD3Q63HM9 321 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 COLCA1Q6ZS62 124 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 RXFP4Q8TDU9 374 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 RNF141Q8WVD5 230 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 PRRX2Q99811 253 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 RARRES2Q99969 163 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 NAA11Q9BSU3 229 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 C20orf24Q9BUV8 137 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 C1QTNF5Q9BXJ0 243 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 SAV1Q9H4B6 383 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 TREM1Q9NP99 234 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 LRFN1Q9P244 771 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 LNP1A1A4G5 178 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 RAB19A4D1S5 217 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 C5orf49A4QMS7 147 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 PCNX2A6NKB5 2137 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 LINC01387J3KSC0 135 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 SCGNO76038 276 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 P04436 131 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 FBP1P09467 338 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 RBM11P57052 281 aaKnown RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 ERVS71-1P61550 626 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 SCRN3Q0VDG4 424 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 PJVKQ0ZLH3 352 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 HIKESHIQ53FT3 197 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 AKIRIN2Q53H80 203 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 MEX3BQ6ZN04 569 aaKnown RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 WDR86Q86TI4 376 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 C1orf210Q8IVY1 113 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 BORCS8Q96FH0 119 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 SF3B5Q9BWJ5 86 aaKnown RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 ARRDC1-AS1Q9H2J1 176 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 NAA60Q9H7X0 242 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 MMP26Q9NRE1 261 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 EP300Q09472 2414 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 FAM24AA6NFZ4 105 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 COLCA2A8K830 154 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 PROB1E7EW31 1015 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 RNASEK-C17orf49H0YIS7 233 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 OR7C1O76099 320 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 GOSR1O95249 250 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 ZNF728P0DKX0 622 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 PPP1CCP36873 323 aaKnown RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 GUCA1AP43080 201 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 CAV2P51636 162 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 Q6ZRG5 221 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 Q6ZRM9 215 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 LYPD6BQ8NI32 183 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 SPSB4Q96A44 273 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 ISOC2Q96AB3 205 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 CLCC1Q96S66 551 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 S100A13Q99584 98 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 ZNF703Q9H7S9 590 aaPredicted RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 GHRLQ9UBU3 117 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 CARHSP1Q9Y2V2 147 aaKnown RBP5.17□□□□□ -1.58
CLCN3-201ENST00000347613 TIMM10BQ9Y5J6 103 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 CELSR1Q9NYQ6 3014 aa5.17□□□□□ -1.58
CLCN3-201ENST00000347613 PQLC2LA1A4F0 135 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 IGSF23A1L1A6 192 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 C9J4A7 227 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 PHF1O43189 567 aaPredicted RBP5.16□□□□□ -1.58
CLCN3-201ENST00000347613 CRYBA1P05813 215 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 SPP1P10451 314 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 HOXA6P31267 233 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 SULT1A2P50226 295 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 LINC00205P59089 165 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 POLR2GP62487 172 aaKnown RBP eCLIP5.16□□□□□ -1.58
CLCN3-201ENST00000347613 ACTBL2Q562R1 376 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 DHRS7BQ6IAN0 325 aaPredicted RBP5.16□□□□□ -1.58
CLCN3-201ENST00000347613 FAM122CQ6P4D5 195 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 PCSK4Q6UW60 755 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 OR2M7Q8NG81 312 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 OR4D5Q8NGN0 318 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 SYT3Q9BQG1 590 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 C1orf123Q9NWV4 160 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 CACFD1Q9UGQ2 172 aa5.16□□□□□ -1.58
CLCN3-201ENST00000347613 DOCK11Q5JSL3 2073 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms