RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 FLYWCH2Q96CP2 140 aaKnown RBP20.37■□□□□ 0.85
NPAS3-201ENST00000346562 SIRT5Q9NXA8 310 aa20.37■□□□□ 0.85
NPAS3-201ENST00000346562 MRM1Q6IN84 353 aaKnown RBP20.37■□□□□ 0.85
NPAS3-201ENST00000346562 PCOLCE2Q9UKZ9 415 aa20.37■□□□□ 0.85
NPAS3-201ENST00000346562 CSF2RBP32927 897 aa20.37■□□□□ 0.85
NPAS3-201ENST00000346562 GPR35Q9HC97 309 aa20.37■□□□□ 0.85
NPAS3-201ENST00000346562 HOXB3P14651 431 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-201ENST00000346562 CBLN3Q6UW01 205 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 ZNF683Q8IZ20 524 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 CLRN3Q8NCR9 226 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 DUSP15Q9H1R2 295 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-201ENST00000346562 CCL4P13236 92 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 NQO2P16083 231 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 DYNLT3P51808 116 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 SMAGPQ0VAQ4 97 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 TMEM183BQ1AE95 376 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 SPNS2Q8IVW8 549 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 TEX29Q8N6K0 151 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 OR4C5Q8NGB2 326 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 ALG14Q96F25 216 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 FAM60AQ9NP50 221 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 DUXBA0A1W2PPF3 345 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 PHOX2AO14813 284 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 KIAA0040Q15053 153 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 PIPOXQ9P0Z9 390 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 CTF1Q16619 201 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 FAHD2BQ6P2I3 314 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-201ENST00000346562 NFAM1Q8NET5 270 aaPredicted RBP20.36■□□□□ 0.85
NPAS3-201ENST00000346562 FAHD2AQ96GK7 314 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 CRISPLD2Q9H0B8 497 aa20.36■□□□□ 0.85
NPAS3-201ENST00000346562 RAG2P55895 527 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 C1orf185Q5T7R7 199 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 WDR54Q9H977 334 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 SLC52A3Q9NQ40 469 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 MPC2O95563 127 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 RIGQ13278 110 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 ZNF273Q14593 569 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 SCN7AQ01118 1682 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 A0A1B0GTH9 108 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 YBX1P67809 324 aaKnown RBP20.35■□□□□ 0.85
NPAS3-201ENST00000346562 IZUMO4Q1ZYL8 232 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 CLLU1Q5K131 121 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 FAM219AQ8IW50 185 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 COX6B1P14854 86 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 ST3GAL2Q16842 350 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 MYO18AQ92614 2054 aaKnown RBP20.35■□□□□ 0.85
NPAS3-201ENST00000346562 COL22A1Q8NFW1 1626 aaPredicted RBP20.35■□□□□ 0.85
NPAS3-201ENST00000346562 C10orf113Q5VZT2 155 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 ATG4DQ86TL0 474 aaPredicted RBP20.35■□□□□ 0.85
NPAS3-201ENST00000346562 NAT8Q9UHE5 227 aa20.35■□□□□ 0.85
NPAS3-201ENST00000346562 CDIPTO14735 213 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 SYNGR2O43760 224 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 P01737 135 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 HTN1P15515 57 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 FGF8P55075 233 aaPredicted RBP20.34■□□□□ 0.85
NPAS3-201ENST00000346562 C21orf58P58505 322 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 MESTQ5EB52 335 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 FAM78BQ5VT40 261 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 SLC23A3Q6PIS1 610 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 ZNF547Q8IVP9 402 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 DTD1Q8TEA8 209 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 ZNF764Q96H86 408 aaPredicted RBP20.34■□□□□ 0.85
NPAS3-201ENST00000346562 CLN8Q9UBY8 286 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 TINAGQ9UJW2 476 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 J3QT63 122 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 PTBP3O95758 552 aaKnown RBP20.34■□□□□ 0.85
NPAS3-201ENST00000346562 PSMB2P49721 201 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 WASHC3Q9Y3C0 194 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 DNPH1O43598 174 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 PRSS1P07477 247 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 SELENOPP49908 381 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 WDR13Q9H1Z4 485 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 ANXA10Q9UJ72 324 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 DOCK2Q92608 1830 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 SPAARA0A1B0GVQ0 90 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 CAMPP49913 170 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 KHDC3LQ587J8 217 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 VSIG4Q9Y279 399 aa20.34■□□□□ 0.85
NPAS3-201ENST00000346562 ANKRD20A5PA0PJZ0 165 aa20.33■□□□□ 0.85
NPAS3-201ENST00000346562 RABAC1Q9UI14 185 aa20.33■□□□□ 0.85
NPAS3-201ENST00000346562 MRM2Q9UI43 246 aaKnown RBP20.33■□□□□ 0.85
NPAS3-201ENST00000346562 MGPP08493 103 aa20.33■□□□□ 0.85
NPAS3-201ENST00000346562 CEBPEQ15744 281 aa20.33■□□□□ 0.85
NPAS3-201ENST00000346562 SLC25A42Q86VD7 318 aa20.33■□□□□ 0.85
NPAS3-201ENST00000346562 PAPPAQ13219 1627 aa20.33■□□□□ 0.85
NPAS3-201ENST00000346562 GAB4Q2WGN9 574 aa20.33■□□□□ 0.85
NPAS3-201ENST00000346562 ANAPC16Q96DE5 110 aa20.33■□□□□ 0.85
NPAS3-201ENST00000346562 PHYHIPLQ96FC7 376 aa20.33■□□□□ 0.84
NPAS3-201ENST00000346562 ZNF385DQ9H6B1 395 aa20.33■□□□□ 0.84
NPAS3-201ENST00000346562 FBXL17Q9UF56 701 aa20.33■□□□□ 0.84
NPAS3-201ENST00000346562 KIR2DL1P43626 348 aaPredicted RBP20.33■□□□□ 0.84
NPAS3-201ENST00000346562 KIR2DL2P43627 348 aaPredicted RBP20.33■□□□□ 0.84
NPAS3-201ENST00000346562 HMGA2P52926 109 aa20.33■□□□□ 0.84
NPAS3-201ENST00000346562 MS4A7Q9GZW8 240 aaPredicted RBP20.33■□□□□ 0.84
NPAS3-201ENST00000346562 ECSCRQ19T08 205 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 MPV17LQ2QL34 196 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 C1orf174Q8IYL3 243 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 RPS4Y2Q8TD47 263 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 TRBV23-1A0A0A0MS06 115 aa20.32■□□□□ 0.84
NPAS3-201ENST00000346562 ZBTB34Q8NCN2 500 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms