RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.32□□□□□ -0.28
RAB5C-201ENST00000346213 OR4D6Q8NGJ1 314 aa13.32□□□□□ -0.28
RAB5C-201ENST00000346213 OR11L1Q8NGX0 322 aa13.32□□□□□ -0.28
RAB5C-201ENST00000346213 OR8S1Q8NH09 359 aa13.32□□□□□ -0.28
RAB5C-201ENST00000346213 C1orf147Q96MC9 270 aaPredicted RBP13.32□□□□□ -0.28
RAB5C-201ENST00000346213 RGCCQ9H4X1 137 aa13.32□□□□□ -0.28
RAB5C-201ENST00000346213 ZNF69Q9UC07 566 aa13.32□□□□□ -0.28
RAB5C-201ENST00000346213 WNK2Q9Y3S1 2297 aa13.32□□□□□ -0.28
RAB5C-201ENST00000346213 FAM240BA0A1B0GVZ2 78 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 hCG_1807616A0A1W2PRN6 198 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 DHRS7CA6NNS2 312 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 RAB6AP20340 208 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 GNB2P62879 340 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 DYRK1AQ13627 763 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 FAM76BQ5HYJ3 339 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 THOC7Q6I9Y2 204 aaKnown RBP13.31□□□□□ -0.28
RAB5C-201ENST00000346213 PLET1Q6UQ28 207 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 C1orf87Q8N0U7 546 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 FAM216BQ8N7L0 139 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 SCCPDHQ8NBX0 429 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 OR5T2Q8NGG2 359 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 FCAMRQ8WWV6 532 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 NKX3-1Q99801 234 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-201ENST00000346213 MMP28Q9H239 520 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 CNTD2Q9H8S5 307 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 MIOXQ9UGB7 285 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 METRNQ9UJH8 293 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 ZNF391Q9UJN7 358 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 RBMX2Q9Y388 322 aaKnown RBP13.31□□□□□ -0.28
RAB5C-201ENST00000346213 A0A0A6YYH2 397 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 A6NJ64 397 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 CENPXA8MT69 81 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 SRRM5B3KS81 715 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 BPNT1O95861 308 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 SLC6A1P30531 599 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 ZNF93P35789 620 aaPredicted RBP13.31□□□□□ -0.28
RAB5C-201ENST00000346213 GDNFP39905 211 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 GPM6AP51674 278 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 UTS2BQ765I0 119 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 SPERTQ8NA61 448 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 CSNK2A3Q8NEV1 391 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 OR8B3Q8NGG8 313 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 OR52I2Q8NH67 350 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 PP6455Q8WZ26 134 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 PHF21AQ96BD5 680 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 OR8B2Q96RD0 313 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 CCL13Q99616 98 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 KCNK15Q9H427 330 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 AUNIPQ9H7T9 357 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 FBLN5Q9UBX5 448 aa13.31□□□□□ -0.28
RAB5C-201ENST00000346213 BOLA2-SMG1P6H3BVE0 249 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 AKR7A2O43488 359 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 ADAM20O43506 726 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 ORC5O43913 435 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 ECDO95905 644 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-201ENST00000346213 SFTPBP07988 381 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 IRF2P14316 349 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 DLX1P56177 255 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 KLF9Q13886 244 aaPredicted RBP13.3□□□□□ -0.28
RAB5C-201ENST00000346213 RNASE12Q5GAN4 147 aaKnown RBP13.3□□□□□ -0.28
RAB5C-201ENST00000346213 TMEM42Q69YG0 159 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 TAF15Q92804 592 aaKnown RBP eCLIP13.3□□□□□ -0.28
RAB5C-201ENST00000346213 ZNF488Q96MN9 340 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 ATG5Q9H1Y0 275 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 NLKQ9UBE8 527 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 RAB22AQ9UL26 194 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 PIGLQ9Y2B2 252 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 AUP1Q9Y679 476 aa13.3□□□□□ -0.28
RAB5C-201ENST00000346213 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-201ENST00000346213 ZNF816-ZNF321PA0A0X1KG74 233 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 MDFIC2A0A1B0GVS7 189 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 TCF21O43680 179 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 MMP9P14780 707 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 GATA3P23771 443 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 QRFPP83859 136 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 PRB3Q04118 309 aaPredicted RBP13.29□□□□□ -0.28
RAB5C-201ENST00000346213 PLA1AQ53H76 456 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 STUMQ69YW2 141 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 ZDHHC23Q8IYP9 409 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 BATF2Q8N1L9 274 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 ZDHHC22Q8N966 263 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 SPATA3Q8NHX4 192 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 TMEM158Q8WZ71 300 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 RNF170Q96K19 258 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 MARVELD1Q9BSK0 173 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 CHST5Q9GZS9 411 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 OR51I2Q9H344 312 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 GPR173Q9NS66 373 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 CLN8Q9UBY8 286 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 NOP16Q9Y3C1 178 aaKnown RBP13.29□□□□□ -0.28
RAB5C-201ENST00000346213 MPC1Q9Y5U8 109 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 FBN3Q75N90 2809 aa13.29□□□□□ -0.28
RAB5C-201ENST00000346213 IGKV1-9A0A0C4DH69 117 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 KIR2DS1A0A191URI9 304 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 MEIOCA2RUB1 952 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 DVL1O14640 695 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 KDM4BO94953 1096 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 BTCP35070 178 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 CFHR2P36980 270 aa13.28□□□□□ -0.28
RAB5C-201ENST00000346213 AP3S2P59780 193 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms