RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 P4HTMQ9NXG6 502 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 SEC11BP0C7V7 166 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 OR1D5P58170 312 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 PARM1Q6UWI2 310 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 ZBTB34Q8NCN2 500 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 A0A1W2PPC4 97 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 RBPMS2Q6ZRY4 209 aaKnown RBP17.26■□□□□ 0.35
HDAC4-201ENST00000345617 KISS1RQ969F8 398 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-201ENST00000345617 CDX2Q99626 313 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-201ENST00000345617 NAGKQ9UJ70 344 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 FUT9Q9Y231 359 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 TRBV5-4A0A0C4DH59 114 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 HLA-DQA1P01909 254 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 CA3P07451 260 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 INSM1Q01101 510 aaPredicted RBP17.26■□□□□ 0.35
HDAC4-201ENST00000345617 OR1N2Q8NGR9 330 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 MISP3Q96FF7 219 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 OR51B4Q9Y5P0 310 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 C7orf77A4D0Y5 90 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 CA2P00918 260 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 OR2D2Q9H210 308 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 COL8A1P27658 744 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 PTP4A1Q93096 173 aa17.26■□□□□ 0.35
HDAC4-201ENST00000345617 MMP9P14780 707 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 OR51M1Q9H341 326 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 MARCH5Q9NX47 278 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 GABRA1P14867 456 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 CIRBPQ14011 172 aaKnown RBP17.25■□□□□ 0.35
HDAC4-201ENST00000345617 VN1R17PQ8TDU5 208 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 ABHD14BQ96IU4 210 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 GPR61Q9BZJ8 451 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 DHCR7Q9UBM7 475 aaKnown RBP17.25■□□□□ 0.35
HDAC4-201ENST00000345617 PPIAP62937 165 aaKnown RBP17.25■□□□□ 0.35
HDAC4-201ENST00000345617 ZNF750Q32MQ0 723 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 FAM221AA4D161 298 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 TMEM202A6NGA9 273 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 CRYBA1P05813 215 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 DDTP30046 118 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 PWWP2BQ6NUJ5 590 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 OR5R1Q8NH85 324 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 ROS1P08922 2347 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 NPY1RP25929 384 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 GUCA2AQ02747 115 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 C21orf62-AS1Q17RA5 79 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 LINC00696Q6ZRV3 163 aa17.25■□□□□ 0.35
HDAC4-201ENST00000345617 LEMD1Q68G75 181 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 BTLAQ7Z6A9 289 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 OR1B1Q8NGR6 318 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 MPDU1O75352 247 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 EPPINO95925 133 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 ERVFRD-1P60508 538 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 PRSS36Q5K4E3 855 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 TMEM65Q6PI78 240 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 CA13Q8N1Q1 262 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 OR10V1Q8NGI7 309 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 CTXND1A0A1B0GTU2 59 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 G3V3Y1 287 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 M0R296 226 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 LIMK1P53667 647 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 FGF8P55075 233 aaPredicted RBP17.24■□□□□ 0.35
HDAC4-201ENST00000345617 SMUG1Q53HV7 270 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 CBLN2Q8IUK8 224 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 GAPDHP04406 335 aaKnown RBP17.24■□□□□ 0.35
HDAC4-201ENST00000345617 OR2V2Q96R30 315 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 FBXO4Q9UKT5 387 aa17.24■□□□□ 0.35
HDAC4-201ENST00000345617 SH2D5Q6ZV89 423 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 PAQR9Q6ZVX9 377 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 EMDP50402 254 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 MYBPHQ13203 477 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 TGIF2LXQ8IUE1 241 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 PLXNB1O43157 2135 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 NCMAPQ5T1S8 102 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 FNDC7Q5VTL7 733 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 HSD17B10Q99714 261 aaKnown RBP17.23■□□□□ 0.35
HDAC4-201ENST00000345617 PLEKHB1Q9UF11 243 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-201ENST00000345617 IL17BQ9UHF5 180 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 OOEPA6NGQ2 149 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 CCR5P51681 352 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 GNB2P62879 340 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 FAM209BQ5JX69 171 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 C1orf174Q8IYL3 243 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 MARVELD3Q96A59 401 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 IFITM10A6NMD0 228 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 SNRNP40Q96DI7 357 aaKnown RBP17.23■□□□□ 0.35
HDAC4-201ENST00000345617 ATP23Q9Y6H3 246 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 TMEM183AQ8IXX5 376 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 BCL2P10415 239 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 KIR2DL1P43626 348 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-201ENST00000345617 KIR2DL2P43627 348 aaPredicted RBP17.23■□□□□ 0.35
HDAC4-201ENST00000345617 OR13G1Q8NGZ3 307 aa17.23■□□□□ 0.35
HDAC4-201ENST00000345617 M0R1B8 84 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 B3GALT4O96024 378 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 CDKN2AP42771 156 aaKnown RBP17.22■□□□□ 0.35
HDAC4-201ENST00000345617 PTX4Q96A99 478 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 CCR2P41597 374 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 DMRT1Q9Y5R6 373 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 CA11O75493 328 aa17.22■□□□□ 0.35
HDAC4-201ENST00000345617 SRSF10O75494 262 aaKnown RBP17.22■□□□□ 0.35
HDAC4-201ENST00000345617 PRR35P0CG20 571 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms