RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CEACAM21Q3KPI0 293 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 HAGHLQ6PII5 290 aaPredicted RBP12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 RIF1Q5UIP0 2472 aaKnown RBP12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 ARGFXA6NJG6 315 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 F8W036 122 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 SCTP09683 121 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 PLA2G2CQ5R387 149 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 TMEM88Q6PEY1 159 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 TMPRSS7Q7RTY8 843 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 GALNT14Q96FL9 552 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 POM121L2Q96KW2 1035 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 MMP26Q9NRE1 261 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 ATPIF1Q9UII2 106 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 AMDHD2Q9Y303 409 aa12.78□□□□□ -0.36
VIPAS39-202ENST00000343765 TRAPPC2LH3BP13 241 aa12.77□□□□□ -0.36
VIPAS39-202ENST00000343765 PRKACAP17612 351 aa12.77□□□□□ -0.36
VIPAS39-202ENST00000343765 MSI2Q96DH6 328 aaKnown RBP12.77□□□□□ -0.36
VIPAS39-202ENST00000343765 HIST1H2AAQ96QV6 131 aa12.77□□□□□ -0.36
VIPAS39-202ENST00000343765 SYT3Q9BQG1 590 aa12.77□□□□□ -0.36
VIPAS39-202ENST00000343765 SUCNR1Q9BXA5 334 aa12.77□□□□□ -0.36
VIPAS39-202ENST00000343765 KLF13Q9Y2Y9 288 aaPredicted RBP12.77□□□□□ -0.36
VIPAS39-202ENST00000343765 CD300LBA8K4G0 201 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 ZNF724A8MTY0 619 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 TAAR5O14804 337 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 NME2P1O60361 137 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 IL32P24001 234 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 FGF12P61328 243 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 SLC10A1Q14973 349 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 FBXW12Q6X9E4 464 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 PUSL1Q8N0Z8 303 aaKnown RBP12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 LGI3Q8N145 548 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 C17orf78Q8N4C9 275 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 SLC35G3Q8N808 338 aa12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 SMG1Q96Q15 3661 aaKnown RBP12.77□□□□□ -0.37
VIPAS39-202ENST00000343765 GVINP1Q7Z2Y8 2422 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 CST4P01036 141 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 ARR3P36575 388 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 WNT5AP41221 380 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 TMEM268Q5VZI3 342 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 SUMF1Q8NBK3 374 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 C18orf12Q96KH6 178 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 PLA2G2EQ9NZK7 142 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 A0A1W2PR80 420 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 KLRC4-KLRK1H3BQV0 150 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 TRIM77I1YAP6 450 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 HS3ST1O14792 307 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 APLNRP35414 380 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 EIF5AP63241 154 aaKnown RBP12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 PMP22Q01453 160 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 RNPS1Q15287 305 aaKnown RBP12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 RNFT1Q5M7Z0 435 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 OR2T2Q6IF00 324 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 CCDC71LQ8N9Z2 235 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 MDS2Q8NDY4 140 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 RSRP1Q9BUV0 290 aa12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 FBXO9Q9UK97 447 aaPredicted RBP12.76□□□□□ -0.37
VIPAS39-202ENST00000343765 IGHV3-64DA0A0J9YX35 117 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 ASCL1P50553 236 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 ARG2P78540 354 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 CLN3Q13286 438 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 EIF5AL1Q6IS14 154 aaKnown RBP12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 MKXQ8IYA7 352 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 RDH5Q92781 318 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 FER1L6-AS2Q96M78 137 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 TLNRD1Q9H1K6 362 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 RHOFQ9HBH0 211 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 KMT2EQ8IZD2 1858 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 C3orf85A0A1B0GTC6 90 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 E5RGE8 158 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 H7C1Q1 480 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 SLC33A1O00400 549 aaPredicted RBP12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 CDK2AP1O14519 115 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 MPPED1O15442 326 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 IL18BPO95998 194 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 TK1P04183 234 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 MUC1P15941 1255 aaPredicted RBP12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 GNRHRP30968 328 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 PJVKQ0ZLH3 352 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 DPPA2Q7Z7J5 298 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 Q9N2K0 584 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 SPRR3Q9UBC9 169 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 NSG2Q9Y328 171 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 ANKRD30BLA7E2S9 258 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 HSD17B6O14756 317 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 TNFSF12O43508 249 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 JTBO76095 146 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 COX5BP10606 129 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 CD46P15529 392 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 CA6P23280 308 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 HERPUD1Q15011 391 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 TBC1D26Q86UD7 250 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 MDP1Q86V88 176 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 SVBPQ8N300 66 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 ZNF565Q8N9K5 539 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 SMIM8Q96KF7 97 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM86C1Q9NVL1 165 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 ZDHHC8Q9ULC8 765 aa12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 RCL1Q9Y2P8 373 aaKnown RBP12.75□□□□□ -0.37
VIPAS39-202ENST00000343765 UBE2J1Q9Y385 318 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms