RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 SYT3Q9BQG1 590 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 PCGF1Q9BSM1 259 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 B3GAT1Q9P2W7 334 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 FUT9Q9Y231 359 aa12.9□□□□□ -0.34
CLCN1-201ENST00000343257 LOC102723971A0A1B0GUV8 181 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 CYB5R3P00387 301 aaPredicted RBP12.89□□□□□ -0.35
CLCN1-201ENST00000343257 PAX5Q02548 391 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF787Q6DD87 383 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 C16orf82Q7Z2V1 217 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 MYPOPQ86VE0 399 aaPredicted RBP12.89□□□□□ -0.35
CLCN1-201ENST00000343257 TMEM234Q8WY98 164 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 SMDT1Q9H4I9 107 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 DKKL1Q9UK85 242 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 C3orf85A0A1B0GTC6 90 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 PITX3O75364 302 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 IGHG1P01857 330 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 NPSP0C0P6 89 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 CCL5P13501 91 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 GZMHP20718 246 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 ECI1P42126 302 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 RPS18P62269 152 aaKnown RBP12.89□□□□□ -0.35
CLCN1-201ENST00000343257 DEFB119Q8N690 84 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 RAB24Q969Q5 203 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 VSTM2BA6NLU5 285 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 ZNHIT1O43257 154 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 AKT2P31751 481 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 WNT5AP41221 380 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 ELLP55199 621 aaPredicted RBP12.89□□□□□ -0.35
CLCN1-201ENST00000343257 ZFP36L1Q07352 338 aaKnown RBP12.89□□□□□ -0.35
CLCN1-201ENST00000343257 TESK1Q15569 626 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 LBHQ53QV2 105 aaPredicted RBP12.89□□□□□ -0.35
CLCN1-201ENST00000343257 SSX7Q7RTT5 188 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 MRGPRX1Q96LB2 322 aa12.89□□□□□ -0.35
CLCN1-201ENST00000343257 PNRC2Q9NPJ4 139 aaKnown RBP12.89□□□□□ -0.35
CLCN1-201ENST00000343257 KIR2DS5A0A0G2JLQ3 304 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 A0A0G2JNG1 304 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 LIPT2A6NK58 231 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 KIR2DS3K7RE56 304 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 PCP4P48539 62 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 KIR2DS5Q14953 304 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 THEM4Q5T1C6 240 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 ODF3L1Q8IXM7 274 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 IL22RA1Q8N6P7 574 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF296Q8WUU4 475 aaPredicted RBP12.88□□□□□ -0.35
CLCN1-201ENST00000343257 DDIT4LQ96D03 193 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 Q96M66 194 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 RPRMQ9NS64 109 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 KIAA2026Q5HYC2 2103 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
CLCN1-201ENST00000343257 HSPB6O14558 160 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF705DP0CH99 300 aaPredicted RBP12.88□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF705BP0CI00 300 aaPredicted RBP12.88□□□□□ -0.35
CLCN1-201ENST00000343257 SFTPCP11686 197 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 SPINK2P20155 84 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 CD81P60033 236 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 GNB2P62879 340 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 ARL6IP1Q15041 203 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 NOXO1Q8NFA2 376 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 MOB1AQ9H8S9 216 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 PCDH15Q96QU1 1955 aa12.88□□□□□ -0.35
CLCN1-201ENST00000343257 RRP8O43159 456 aaKnown RBP12.87□□□□□ -0.35
CLCN1-201ENST00000343257 RAB4BP61018 213 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 TBC1D26Q86UD7 250 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 SSC4DQ8WTU2 575 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 MRPL13Q9BYD1 178 aaKnown RBP12.87□□□□□ -0.35
CLCN1-201ENST00000343257 TWSG1Q9GZX9 223 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF442Q9H7R0 627 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 AURKAIP1Q9NWT8 199 aaPredicted RBP12.87□□□□□ -0.35
CLCN1-201ENST00000343257 P4HTMQ9NXG6 502 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 KLRF1Q9NZS2 232 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 TNFRSF10CO14798 259 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 DCAF7P61962 342 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 SDF2L1Q9HCN8 221 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 CHD3Q12873 2000 aaKnown RBP12.87□□□□□ -0.35
CLCN1-201ENST00000343257 A0A1W2PQD3 144 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 TRDCB7Z8K6 153 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 M0R143 59 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 MPPED1O15442 326 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 MNX1P50219 401 aaPredicted RBP12.87□□□□□ -0.35
CLCN1-201ENST00000343257 ZP4Q12836 540 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 ZNF100Q8IYN0 542 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 D2HGDHQ8N465 521 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 OR6X1Q8NH79 312 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 SNIP1Q8TAD8 396 aaKnown RBP12.87□□□□□ -0.35
CLCN1-201ENST00000343257 RBMXL1Q96E39 390 aaKnown RBP12.87□□□□□ -0.35
CLCN1-201ENST00000343257 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 TM2D1Q9BX74 207 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 METTL9Q9H1A3 318 aa12.87□□□□□ -0.35
CLCN1-201ENST00000343257 LYRM2Q9NU23 88 aaPredicted RBP12.87□□□□□ -0.35
CLCN1-201ENST00000343257 IGHV3-15A0A0B4J1V0 119 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 PAX1P15863 534 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 SNAI3Q3KNW1 292 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 GPR137CQ8N3F9 429 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 CDH20Q9HBT6 801 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 PPP5D1E7EU14 171 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 DHRS3O75911 302 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 BCL2P10415 239 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 IAPPP10997 89 aa12.86□□□□□ -0.35
CLCN1-201ENST00000343257 CTHP32929 405 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms