RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TMEM250H0YL14 139 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 MMP23AO75900 390 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 DDAH2O95865 285 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 DTYMKP23919 212 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 ARF3P61204 181 aaPredicted RBP16.1■□□□□ 0.17
SMPD1-201ENST00000342245 RPL23P62829 140 aaKnown RBP16.1■□□□□ 0.17
SMPD1-201ENST00000342245 C17orf78Q8N4C9 275 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 ZNF665Q9H7R5 613 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 GOLGA4Q13439 2230 aaKnown RBP16.1■□□□□ 0.17
SMPD1-201ENST00000342245 IGKV1D-8A0A087WSZ0 117 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 BLACEA4D250 179 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 PHF1O43189 567 aaPredicted RBP16.1■□□□□ 0.17
SMPD1-201ENST00000342245 NDUFB8O95169 186 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 RUNX1Q01196 453 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 CMTM2Q8TAZ6 248 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 DEFB118Q96PH6 123 aa16.1■□□□□ 0.17
SMPD1-201ENST00000342245 DUXBA0A1W2PPF3 345 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 ZNF850A8MQ14 1090 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 SOX1O00570 391 aaPredicted RBP16.09■□□□□ 0.17
SMPD1-201ENST00000342245 PLPP3O14495 311 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 RAC2P15153 192 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 ZNF77Q15935 545 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 NNATQ16517 81 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 C16orf52Q8NHV5 167 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 FLVCR1-AS1Q8TAF5 88 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 PSMG3Q9BT73 122 aaPredicted RBP16.09■□□□□ 0.17
SMPD1-201ENST00000342245 THAP10Q9P2Z0 257 aaPredicted RBP16.09■□□□□ 0.17
SMPD1-201ENST00000342245 SLC17A4Q9Y2C5 497 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 LAMA3Q16787 3333 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 CPAMD8Q8IZJ3 1885 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 SSSCA1O60232 199 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 TMEM41BQ5BJD5 291 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 CLEC2AQ6UVW9 174 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 TIPARPQ7Z3E1 657 aaKnown RBP16.09■□□□□ 0.17
SMPD1-201ENST00000342245 RNF144BQ7Z419 303 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 LINC01551Q86U37 167 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 OR5L1Q8NGL2 311 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 ADOQ96SZ5 270 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 OR10A5Q9H207 317 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 PLEKHJ1Q9NW61 149 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 SLC45A2Q9UMX9 530 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 TRAPPC1Q9Y5R8 145 aa16.09■□□□□ 0.17
SMPD1-201ENST00000342245 IL33O95760 270 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 HLA-HP01893 362 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 CCL1P22362 96 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 PLPP4Q5VZY2 271 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 SLC25A24Q6NUK1 477 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 DOK3Q7L591 496 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 DGAT2Q96PD7 388 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 SEPSECSQ9HD40 501 aaKnown RBP16.08■□□□□ 0.17
SMPD1-201ENST00000342245 MBNL1Q9NR56 388 aaKnown RBP16.08■□□□□ 0.17
SMPD1-201ENST00000342245 MCTS1Q9ULC4 181 aaKnown RBP16.08■□□□□ 0.17
SMPD1-201ENST00000342245 WIPI2Q9Y4P8 454 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 B3GALT1Q9Y5Z6 326 aa16.08■□□□□ 0.17
SMPD1-201ENST00000342245 VENTXO95231 258 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 CEACAM5P06731 702 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 ESDP10768 282 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 FOSL2P15408 326 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 CCR2P41597 374 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 DAP3P51398 398 aaKnown RBP16.08■□□□□ 0.16
SMPD1-201ENST00000342245 COMMD2Q86X83 199 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 HCFC1R1Q9NWW0 138 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 PAM16Q9Y3D7 125 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 WNT6Q9Y6F9 365 aa16.08■□□□□ 0.16
SMPD1-201ENST00000342245 NKX2-6A6NCS4 301 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 HRKO00198 91 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 ONECUT2O95948 504 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 OR5G3P0C626 314 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 RPL15P61313 204 aaKnown RBP16.07■□□□□ 0.16
SMPD1-201ENST00000342245 FUT7Q11130 342 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 PHLDA2Q53GA4 152 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 ABHD12BQ7Z5M8 362 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-201ENST00000342245 WDYHV1Q96HA8 205 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 RASL10BQ96S79 203 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 MAGT1Q9H0U3 335 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 PXMP4Q9Y6I8 212 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 MKI67P46013 3256 aaKnown RBP16.07■□□□□ 0.16
SMPD1-201ENST00000342245 SEC13P55735 322 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 IGLV3-21P80748 117 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-201ENST00000342245 SERF2P84101 59 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 CNKSR3Q6P9H4 555 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 LYG1Q8N1E2 194 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF738Q8NE65 137 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 OR5D18Q8NGL1 313 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 SCGB1C1Q8TD33 95 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 IL22RA2Q969J5 263 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 PINX1Q96BK5 328 aaKnown RBP16.07■□□□□ 0.16
SMPD1-201ENST00000342245 ZNF552Q9H707 407 aaPredicted RBP16.07■□□□□ 0.16
SMPD1-201ENST00000342245 RPRMQ9NS64 109 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 UQCR10Q9UDW1 63 aa16.07■□□□□ 0.16
SMPD1-201ENST00000342245 NXT1Q9UKK6 140 aaKnown RBP16.07■□□□□ 0.16
SMPD1-201ENST00000342245 NPIPB13A6NJU9 1138 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 METTL12A8MUP2 240 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 NPIPB4C9JG80 1138 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 IFNL4K9M1U5 179 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 CCL16O15467 120 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 CST7O76096 145 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 UTS2O95399 124 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 GP1BBP13224 206 aa16.06■□□□□ 0.16
SMPD1-201ENST00000342245 UBE2G2P60604 165 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms