RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 IGHG4P01861 327 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 KIAA0141Q14154 515 aaPredicted RBP12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 CYP2R1Q6VVX0 501 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 ZNF429Q86V71 674 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 ENTHD1Q8IYW4 607 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 OR10G2Q8NGC3 310 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 OR1N2Q8NGR9 330 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 DCUN1D4Q92564 292 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 EAF1Q96JC9 268 aaPredicted RBP12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 HRASLS5Q96KN8 279 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 FEVQ99581 238 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 HSPB9Q9BQS6 159 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 PPIL3Q9H2H8 161 aaKnown RBP12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 SAMHD1Q9Y3Z3 626 aaKnown RBP12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 R4GMQ9 66 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 TNCP24821 2201 aa12.7□□□□□ -0.38
NECTIN1-202ENST00000340882 DHRS7CA6NNS2 312 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 I3L521 148 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 CCDC22O60826 627 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 JTBO76095 146 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 CGB3P0DN86 165 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 CGB7P0DN87 165 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 ATP6V1B2P21281 511 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 CCL1P22362 96 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 PSMB8P28062 276 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 FUT6P51993 359 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 GNB1P62873 340 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 EBI3Q14213 229 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 SRSF7Q16629 238 aaKnown RBP eCLIP12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 Q8N6K4 173 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 MYOZ3Q8TDC0 251 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 OR5B12Q96R08 314 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 KLK15Q9H2R5 256 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 PCDHB16Q9NRJ7 776 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 PLSCR3Q9NRY6 295 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 GLS2Q9UI32 602 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 PSG11Q9UQ72 335 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 GSTK1Q9Y2Q3 226 aa12.69□□□□□ -0.38
NECTIN1-202ENST00000340882 RYR1P21817 5038 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 A0A1W2PPE3 182 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 ZNF729A6NN14 1252 aaPredicted RBP12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 NCBP2LA6PVI3 153 aaKnown RBP12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 POU3F4P49335 361 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 CDC42P60953 191 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 TMEM236Q5W0B7 351 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 OR2T5Q6IEZ7 315 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 TGIF2LXQ8IUE1 241 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 Q8N1Y9 231 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 OR2T29Q8NH02 315 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 BORCS8Q96FH0 119 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 HMG20AQ9NP66 347 aa12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 EXOSC4Q9NPD3 245 aaKnown RBP12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 LIN7CQ9NUP9 197 aaKnown RBP12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 AMMECR1Q9Y4X0 333 aaPredicted RBP12.68□□□□□ -0.38
NECTIN1-202ENST00000340882 IGKV1-12A0A0C4DH73 117 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 KBTBD11-OT1A0A1B0GTJ5 212 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 TCRBV5S2A0A599 114 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 OVOL1O14753 267 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 SAP30O75446 220 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 E2F6O75461 281 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 IGKV1D-12P01611 117 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 OR8U8P0C7N1 319 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 REG1BP48304 166 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 GNG10P50151 68 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 CDK5Q00535 292 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 SCN1BQ07699 218 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 ZNF616Q08AN1 781 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 MADCAM1Q13477 382 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 ATXN7L3Q14CW9 347 aaPredicted RBP12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 KRBOX4Q5JUW0 171 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 SPIN3Q5JUX0 258 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 ZNF322Q6U7Q0 402 aaPredicted RBP12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 LHFPL2Q6ZUX7 228 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 TMEM179BQ7Z7N9 219 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 CATSPERDQ86XM0 798 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 Q8IYB0 196 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 OR8H3Q8N146 312 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 ASB17Q8WXJ9 295 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 GON7Q9BXV9 100 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 MOB1AQ9H8S9 216 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 REEP1Q9H902 201 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 C19orf73Q9NVV2 129 aa12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 MRM2Q9UI43 246 aaKnown RBP12.67□□□□□ -0.38
NECTIN1-202ENST00000340882 IGKV1-9A0A0C4DH69 117 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 SH2D1BO14796 132 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 RAB7AP51149 207 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 CXCR4P61073 352 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 LTC4SQ16873 150 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 Q6P435 159 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 ZNF491Q8N8L2 437 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 OR13A1Q8NGR1 328 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 DLX4Q92988 240 aaPredicted RBP12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 CMTM5Q96DZ9 223 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 KCTD7Q96MP8 289 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 CHST5Q9GZS9 411 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 ALX4Q9H161 411 aaPredicted RBP12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 SNX5Q9Y5X3 404 aa12.66□□□□□ -0.38
NECTIN1-202ENST00000340882 IGHV1-3A0A0C4DH29 117 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms