RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ZNF17P17021 662 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 HNF1AP20823 631 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 ZP4Q12836 540 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 MIDNQ504T8 468 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 MRGPRFQ96AM1 343 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 KCNK17Q96T54 332 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 MYOZ1Q9NP98 299 aaPredicted RBP13.12□□□□□ -0.31
BRAT1-201ENST00000340611 KCNJ16Q9NPI9 418 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 PLA2G2EQ9NZK7 142 aa13.12□□□□□ -0.31
BRAT1-201ENST00000340611 SMG1Q96Q15 3661 aaKnown RBP13.11□□□□□ -0.31
BRAT1-201ENST00000340611 NBASA2RRP1 2371 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 IGLV1-36A0A0B4J1U3 117 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 ERCC1P07992 297 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-201ENST00000340611 EMC4Q5J8M3 183 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 FAM166AQ6J272 317 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 BTNL3Q6UXE8 466 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 FRZBQ92765 325 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 ZNF837Q96EG3 531 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-201ENST00000340611 RNF126Q9BV68 326 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 OR5AC2Q9NZP5 309 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 B4GALT7Q9UBV7 327 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 DIRAS3O95661 229 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 PAX1P15863 534 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 FHITP49789 147 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 LHX2P50458 406 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 SRSF4Q08170 494 aaKnown RBP13.11□□□□□ -0.31
BRAT1-201ENST00000340611 CHST4Q8NCG5 386 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 BEND2Q8NDZ0 799 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 SAT2Q96F10 170 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-201ENST00000340611 OXGR1Q96P68 337 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 PHB2Q99623 299 aa13.11□□□□□ -0.31
BRAT1-201ENST00000340611 PARD6GQ9BYG4 376 aaPredicted RBP13.11□□□□□ -0.31
BRAT1-201ENST00000340611 ZNF724A8MTY0 619 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 DAP3P51398 398 aaKnown RBP13.1□□□□□ -0.31
BRAT1-201ENST00000340611 CLRN1P58418 232 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 SSBP1Q04837 148 aaKnown RBP13.1□□□□□ -0.31
BRAT1-201ENST00000340611 RTN4RL2Q86UN3 420 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 SLC25A42Q86VD7 318 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 PNLDC1Q8NA58 520 aaKnown RBP13.1□□□□□ -0.31
BRAT1-201ENST00000340611 ZFP62Q8NB50 900 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-201ENST00000340611 OR13C9Q8NGT0 318 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 HPSE2Q8WWQ2 592 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 FAM46BQ96A09 425 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 SLC25A44Q96H78 314 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-201ENST00000340611 ADGRG7Q96K78 797 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 A0A1W2PNV4 684 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 LMX1BO60663 402 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 HPNP05981 417 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 OR4A8P0C604 315 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 HMGN3Q15651 99 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-201ENST00000340611 FJX1Q86VR8 437 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 OR2V1Q8NHB1 315 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 OTOSQ8NHW6 89 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 FNDC9Q8TBE3 224 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 EXTL1Q92935 676 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 SLC25A31Q9H0C2 315 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 SPRR3Q9UBC9 169 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 MED12LQ86YW9 2145 aa13.1□□□□□ -0.31
BRAT1-201ENST00000340611 NPIPA2E9PIF3 369 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 NPIPA3F8WFD2 350 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 ATXN7O15265 892 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-201ENST00000340611 SIAH2O43255 324 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 IGHMP01871 453 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 CLDN18P56856 261 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 SLC17A1Q14916 467 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 TRAPPC6BQ86SZ2 158 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 ZIC4Q8N9L1 334 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 OR9K2Q8NGE7 335 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 OR5R1Q8NH85 324 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 ASB5Q8WWX0 329 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 RAXQ9Y2V3 346 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 WIPF3A6NGB9 483 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 PGA4P0DJD7 388 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 ERVFRD-1P60508 538 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 CSNK2A1P68400 391 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-201ENST00000340611 C16orf54Q6UWD8 224 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 OR51F2Q8NH61 342 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 OR8B4Q96RC9 309 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 NELFAQ9H3P2 528 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 SLC17A5Q9NRA2 495 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 CKLFQ9UBR5 152 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 TMEM14AQ9Y6G1 99 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 ITPR1Q14643 2758 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 RPLP1P05386 114 aaKnown RBP13.09□□□□□ -0.31
BRAT1-201ENST00000340611 PGA5P0DJD9 388 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 HRH1P35367 487 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 RAC3P60763 192 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 S100A10P60903 97 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 NAAAQ02083 359 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 RHEBQ15382 184 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 ADGRE4PQ86SQ3 457 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 TMEM178AQ8NBL3 297 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 FAAP24Q9BTP7 215 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 MRPL13Q9BYD1 178 aaKnown RBP13.09□□□□□ -0.31
BRAT1-201ENST00000340611 ZNF71Q9NQZ8 489 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-201ENST00000340611 GSKIPQ9P0R6 139 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 MSRB2Q9Y3D2 182 aa13.09□□□□□ -0.31
BRAT1-201ENST00000340611 CRTAPO75718 401 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms