RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZNF728P0DKX0 622 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 EEF1B2P24534 225 aaKnown RBP12.54□□□□□ -0.4
VAPA-201ENST00000340541 ERP29P30040 261 aaKnown RBP12.54□□□□□ -0.4
VAPA-201ENST00000340541 BMXP51813 675 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 GP2P55259 537 aaKnown RBP12.54□□□□□ -0.4
VAPA-201ENST00000340541 P2RX3P56373 397 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 MED22Q15528 200 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 PRSS48Q7RTY5 328 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 CHST4Q8NCG5 386 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 C17orf50Q8WW18 174 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 FAM192AQ9GZU8 254 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 PPA2Q9H2U2 334 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 CKLFQ9UBR5 152 aa12.54□□□□□ -0.4
VAPA-201ENST00000340541 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 hADV38S2A0JD32 116 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 DEGS1O15121 323 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 SC5DO75845 299 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 IGHV4-59P01825 116 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 RBP4P02753 201 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 CSN2P05814 226 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 ZNF44P15621 663 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 IER3P46695 156 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 SCN1BQ07699 218 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 IL13RA2Q14627 380 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 RSU1Q15404 277 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 RBM48Q5RL73 367 aaKnown RBP12.53□□□□□ -0.4
VAPA-201ENST00000340541 ZNF782Q6ZMW2 699 aaPredicted RBP12.53□□□□□ -0.4
VAPA-201ENST00000340541 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 TAF15Q92804 592 aaKnown RBP eCLIP12.53□□□□□ -0.4
VAPA-201ENST00000340541 COQ2Q96H96 371 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 ZNF714Q96N38 554 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 CHIAQ9BZP6 476 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 ZNF581Q9P0T4 197 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 ZNRD1Q9P1U0 126 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 SF3B6Q9Y3B4 125 aaKnown RBP12.53□□□□□ -0.4
VAPA-201ENST00000340541 LINC00312Q9Y6C7 94 aa12.53□□□□□ -0.4
VAPA-201ENST00000340541 TRAV24A0A0B4J272 114 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 hCG_1809904A0A1W2PP81 198 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 A0A1W2PPE2 198 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 A0A1W2PR64 198 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 A0A1W2PRV1 198 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 MEIOCA2RUB1 952 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 KCNAB3O43448 404 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 HTR3BO95264 441 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 FBP1P09467 338 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 MAP2K4P45985 399 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 GLIPR1P48060 266 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 AESQ08117 197 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 GPR50Q13585 617 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 TPBGQ13641 420 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 MIDNQ504T8 468 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 ACSM3Q53FZ2 586 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 NHLRC3Q5JS37 347 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 FAM27D1Q5T7N8 215 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 CDH26Q8IXH8 852 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 MS4A15Q8N5U1 240 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 SSMEM1Q8WWF3 244 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 THRSPQ92748 146 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 NR1H4Q96RI1 486 aaPredicted RBP12.52□□□□□ -0.41
VAPA-201ENST00000340541 TMED9Q9BVK6 235 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 METTL9Q9H1A3 318 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 PPIL3Q9H2H8 161 aaKnown RBP12.52□□□□□ -0.41
VAPA-201ENST00000340541 HEXA-AS1Q9H8Q6 139 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 ING4Q9UNL4 249 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 POMT1Q9Y6A1 747 aa12.52□□□□□ -0.41
VAPA-201ENST00000340541 A0A1W2PP11 408 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 MAS1P04201 325 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 IGHV1-8P0DP01 117 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 COX7A1P24310 79 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 MAPK3P27361 379 aaPredicted RBP12.51□□□□□ -0.41
VAPA-201ENST00000340541 RBM11P57052 281 aaKnown RBP12.51□□□□□ -0.41
VAPA-201ENST00000340541 LIPKQ5VXJ0 399 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 OR4D6Q8NGJ1 314 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 CORO2AQ92828 525 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 MUL1Q969V5 352 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 CCDC90BQ9GZT6 254 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 ISYNA1Q9NPH2 558 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 TNFRSF19Q9NS68 423 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 UBE2J1Q9Y385 318 aaPredicted RBP12.51□□□□□ -0.41
VAPA-201ENST00000340541 RRP15Q9Y3B9 282 aaKnown RBP12.51□□□□□ -0.41
VAPA-201ENST00000340541 FAM96BQ9Y3D0 163 aa12.51□□□□□ -0.41
VAPA-201ENST00000340541 ODAMA1E959 279 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 FAM181BA6NEQ2 426 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 ODF3BA8MYP8 253 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 DENRO43583 198 aaKnown RBP12.5□□□□□ -0.41
VAPA-201ENST00000340541 MMP23AO75900 390 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 CPEP16870 476 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
VAPA-201ENST00000340541 MLLT11Q13015 90 aaPredicted RBP12.5□□□□□ -0.41
VAPA-201ENST00000340541 ATXN7L3Q14CW9 347 aaPredicted RBP12.5□□□□□ -0.41
VAPA-201ENST00000340541 TBCEQ15813 527 aaPredicted RBP12.5□□□□□ -0.41
VAPA-201ENST00000340541 TAF9Q16594 264 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 LRRTM1Q86UE6 522 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 OSR2Q8N2R0 312 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 JAGN1Q8N5M9 183 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
VAPA-201ENST00000340541 BEND2Q8NDZ0 799 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms