RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 FAM53BQ14153 422 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 ZNF573Q86YE8 665 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 ZDHHC22Q8N966 263 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 OR11G2Q8NGC1 345 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 ST8SIA1Q92185 356 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 GALMQ96C23 342 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 LINC00615Q96LM1 132 aaPredicted RBP7.69□□□□□ -1.18
RTN3-202ENST00000339997 CLEC5AQ9NY25 188 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 OR4C45A6NMZ5 311 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 TCF21O43680 179 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 HOXA4Q00056 320 aaPredicted RBP7.69□□□□□ -1.18
RTN3-202ENST00000339997 TFF2Q03403 129 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 RSPO4Q2I0M5 234 aaPredicted RBP7.69□□□□□ -1.18
RTN3-202ENST00000339997 BSXQ3C1V8 233 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 TMEM52Q8NDY8 209 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 OR10G4Q8NGN3 311 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 OR10G9Q8NGN4 311 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 OR10G7Q8NGN6 311 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 B3GAT1Q9P2W7 334 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 WASHC3Q9Y3C0 194 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 FREM2Q5SZK8 3169 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 LCTP09848 1927 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 GCM2O75603 506 aaPredicted RBP7.69□□□□□ -1.18
RTN3-202ENST00000339997 GZMMP51124 257 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 IL10RAQ13651 578 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 FAM162BQ5T6X4 162 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 WDR25Q64LD2 544 aaPredicted RBP7.69□□□□□ -1.18
RTN3-202ENST00000339997 SPRED2Q7Z698 418 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 NOXO1Q8NFA2 376 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 OR8B12Q8NGG6 310 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 MRGPRDQ8TDS7 321 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 CLDN23Q96B33 292 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 LRRC61Q9BV99 259 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 GPR27Q9NS67 375 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 OR5AC2Q9NZP5 309 aa7.69□□□□□ -1.18
RTN3-202ENST00000339997 SERTM1A2A2V5 107 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 M0R1B8 84 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 TRGC2P03986 189 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 AREGP15514 252 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 NHLH1Q02575 133 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 FZD5Q13467 585 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 PIGYQ3MUY2 71 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 WDR88Q6ZMY6 472 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 TSEN54Q7Z6J9 526 aaKnown RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 LYG1Q8N1E2 194 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 OR1F12Q8NHA8 337 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 RBM14Q96PK6 669 aaKnown RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 NAA60Q9H7X0 242 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 CCL28Q9NRJ3 127 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 VSIG4Q9Y279 399 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 POLDIP2Q9Y2S7 368 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 HS3ST3A1Q9Y663 406 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 NKX2-6A6NCS4 301 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 NGFP01138 241 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 HLA-DQB1P01920 261 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 GALNSP34059 522 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 PABPC1L2AQ5JQF8 200 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 ZNF660Q6AZW8 331 aaPredicted RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 ZNF770Q6IQ21 691 aaPredicted RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 WFDC8Q8IUA0 241 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 ZNF707Q96C28 371 aaPredicted RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 MRGPRX3Q96LB0 322 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 AMELYQ99218 206 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 EGLN1Q9GZT9 426 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 ZNF576Q9H609 170 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 RCC2Q9P258 522 aaKnown RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 MRPS18BQ9Y676 258 aaKnown RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 FRG2CA6NGY1 282 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 LRRC30A6NM36 301 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 KLRC4-KLRK1H3BQV0 150 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 COX7A2P2O60397 106 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 SEMA7AO75326 666 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 OR5AL1P0C617 328 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 C9orf50Q5SZB4 431 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 COL13A1Q5TAT6 717 aaPredicted RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 LYRM7Q5U5X0 104 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 LRRC75AQ8NAA5 344 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 ABHD3Q8WU67 409 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 ASB5Q8WWX0 329 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 DPH3Q96FX2 82 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 GPR61Q9BZJ8 451 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 C17orf51A8MQB3 221 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 LMX1BO60663 402 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 GP1BAP07359 652 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 VSIG8P0DPA2 414 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 OR3A1P47881 315 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 PTCRAQ6ISU1 281 aaPredicted RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 ETV3LQ6ZN32 361 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 KLHDC1Q8N7A1 406 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 CYB561D1Q8N8Q1 229 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 OR1N1Q8NGS0 311 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 OR2T10Q8NGZ9 312 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 PP6455Q8WZ26 134 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 MRPS24Q96EL2 167 aaKnown RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 ADAT3Q96EY9 351 aaPredicted RBP7.68□□□□□ -1.18
RTN3-202ENST00000339997 MRGPRX4Q96LA9 322 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 OR2D2Q9H210 308 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 MMP17Q9ULZ9 603 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 SLX4Q8IY92 1834 aa7.68□□□□□ -1.18
RTN3-202ENST00000339997 TTC28Q96AY4 2481 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms