RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 KCNS1Q96KK3 526 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LMF1Q96S06 567 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NPVFQ9HCQ7 196 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SH2D2AQ9NP31 389 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PARP11Q9NR21 331 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GALPQ9UBC7 116 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LHX3Q9UBR4 397 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 DSPPQ9NZW4 1301 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TRAV30A0A087WSZ9 112 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LILRA5A6NI73 299 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 H0Y8X5 98 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 FGF5P12034 268 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TTC32Q5I0X7 151 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CST9LP1Q5W188 147 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 C6orf201Q7Z4U5 140 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 KRTCAP2Q8N6L1 136 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ARIH2OSQ8N7S6 290 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZFP62Q8NB50 900 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM229BQ8NBD8 167 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR5R1Q8NH85 324 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SLC37A2Q8TED4 501 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GPR82Q96P67 336 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 KLF16Q9BXK1 252 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 HAPLN2Q9GZV7 340 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF552Q9H707 407 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 IL17CQ9P0M4 197 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 RNF114Q9Y508 228 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 URGCP-MRPS24S4R325 110 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF860A6NHJ4 632 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 AKR7A3O95154 331 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 MPIG6BO95866 241 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TRGC1P0CF51 173 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PSMB5P28074 263 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 RPS4XP62701 263 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF77Q15935 545 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TMEM241Q24JQ0 296 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF534Q76KX8 674 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 FAM213BQ8TBF2 198 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SFT2D1Q8WV19 159 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GALNT14Q96FL9 552 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LINC00615Q96LM1 132 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SLC26A1Q9H2B4 701 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 RCE1Q9Y256 329 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 A0A1B0GU03 582 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PPM1DO15297 605 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 AKR7A2O43488 359 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NDUFB3O43676 98 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CTSDP07339 412 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 T-ENOLP0DO92 83 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 EGR1P18146 543 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CTGFP29279 349 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SDHAP31040 664 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NBL1P41271 181 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 PRRX1P54821 245 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 EIF4EBP2Q13542 120 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SLC22A6Q4U2R8 563 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 C1orf185Q5T7R7 199 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 AADACL3Q5VUY0 350 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 AAED1Q7RTV5 226 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CENPVQ7Z7K6 275 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 MUC20Q8N307 709 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LIPHQ8WWY8 451 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 AQP3Q92482 292 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 NUDT11Q96G61 164 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SRRQ9GZT4 340 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LPAR2Q9HBW0 351 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TNFSF18Q9UNG2 199 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TRGV10A0A0A0MS01 117 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 A0A0D9SEW6 157 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GCM2O75603 506 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR7C1O76099 320 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CAPNS1P04632 268 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SCGB1C2P0DMR2 95 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CD22P20273 847 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CD70P32970 193 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 TNFSF8P32971 234 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 RPS18P62269 152 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 RPL30P62888 115 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 HOXC5Q00444 222 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZNF90Q03938 601 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ALKBH1Q13686 389 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 CDONQ4KMG0 1287 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 RPUSD3Q6P087 351 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LILRA6Q6PI73 481 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 RASL11AQ6T310 242 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 H1FNTQ75WM6 255 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR10W1Q8NGF6 305 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR52N4Q8NGI2 321 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR5M1Q8NGP8 315 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OR2G3Q8NGZ4 309 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GUCD1Q96NT3 240 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OPALINQ96PE5 141 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 SF3B5Q9BWJ5 86 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 GPR35Q9HC97 309 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 UQCC1Q9NVA1 299 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 USP36Q9P275 1121 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 OPN4Q9UHM6 478 aa2.93□□□□□ -1.94
CSMD3-202ENST00000339701 LSM5Q9Y4Y9 91 aaKnown RBP2.93□□□□□ -1.94
CSMD3-202ENST00000339701 V9GYH0 126 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms