RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 RHOGP84095 191 aa8.41□□□□□ -1.06
PTCHD4-201ENST00000339488 SRSF7Q16629 238 aaKnown RBP eCLIP8.41□□□□□ -1.063e-7■■■■■ 29.7
PTCHD4-201ENST00000339488 MEP1BQ16820 701 aa8.41□□□□□ -1.06
PTCHD4-201ENST00000339488 PHF19Q5T6S3 580 aa8.41□□□□□ -1.06
PTCHD4-201ENST00000339488 TMCO2Q7Z6W1 182 aaPredicted RBP8.41□□□□□ -1.06
PTCHD4-201ENST00000339488 ASB5Q8WWX0 329 aa8.41□□□□□ -1.06
PTCHD4-201ENST00000339488 UHRF2Q96PU4 802 aa8.41□□□□□ -1.06
PTCHD4-201ENST00000339488 C1orf123Q9NWV4 160 aa8.41□□□□□ -1.06
PTCHD4-201ENST00000339488 PLXNA2O75051 1894 aa8.41□□□□□ -1.06
PTCHD4-201ENST00000339488 A0A1B0GWA3 101 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 SERINC4A6NH21 518 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 RNF212BA8MTL3 300 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 NDUFS4O43181 175 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 NDUFB2O95178 105 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 C1orf105O95561 183 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 BCL2P10415 239 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 DNASE1L1P49184 302 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 POU3F1Q03052 451 aaPredicted RBP8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 TESK1Q15569 626 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 MPV17L2Q567V2 206 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 Q7L0L9 218 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 ABHD12BQ7Z5M8 362 aaPredicted RBP8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 TMEM144Q7Z5S9 345 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 TGIF2LYQ8IUE0 185 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 OR8I2Q8N0Y5 310 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 NRN1Q9NPD7 142 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 ELOVL5Q9NYP7 299 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 ADAM29Q9UKF5 820 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 RARRES3Q9UL19 164 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 A0A0A6YYD4 124 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 TRAV8-6A0A0B4J262 113 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 IGLC7A0M8Q6 106 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 GABRA3P34903 492 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 ARF3P61204 181 aaPredicted RBP8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 ARF1P84077 181 aaKnown RBP8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 PSG9Q00887 426 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 PAX2Q02962 417 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 MSMO1Q15800 293 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 PLAC9Q5JTB6 97 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 DCST2Q5T1A1 773 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 FBXW12Q6X9E4 464 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 Q6ZVL8 140 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 ZAR1Q86SH2 424 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 OR5C1Q8NGR4 320 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 OR1B1Q8NGR6 318 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 AICDAQ9GZX7 198 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 LYRM2Q9NU23 88 aaPredicted RBP8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 TUBD1Q9UJT1 453 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 CLEC4EQ9ULY5 219 aa8.4□□□□□ -1.06
PTCHD4-201ENST00000339488 IGLV3-16A0A075B6K0 115 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 A0A1B0GV72 72 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 GRXCR1A8MXD5 290 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 GPR89AB7ZAQ6 455 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 RBFOX2O43251 390 aaKnown RBP eCLIP8.4□□□□□ -1.071e-6■■□□□ 14
PTCHD4-201ENST00000339488 SYNGR4O95473 234 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 IGLV3-27P01718 113 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 HLA-DQA2P01906 255 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 GPR89BP0CG08 455 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 CBLN1P23435 193 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 CSNK2A1P68400 391 aaPredicted RBP8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 ZNF787Q6DD87 383 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 BAGE3Q86Y29 109 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 BAGE2Q86Y30 109 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 C20orf196Q8IYI0 205 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 UBALD2Q8IYN6 164 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 CSNK2A3Q8NEV1 391 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 PLPPR1Q8TBJ4 325 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 CTDSP1Q9GZU7 261 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 GPR84Q9NQS5 396 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 B3GALT5Q9Y2C3 310 aa8.4□□□□□ -1.07
PTCHD4-201ENST00000339488 MANSC4A6NHS7 340 aaPredicted RBP8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 LDB3O75112 727 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 FRMD6-AS1P0C7T7 363 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 VSIG8P0DPA2 414 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 EGR1P18146 543 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 CTGFP29279 349 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 S100GP29377 79 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 CORO1AP31146 461 aaKnown RBP8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 GABRA2P47869 451 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 SEC13P55735 322 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 UBE2NP61088 152 aaKnown RBP8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 RPL15P61313 204 aaKnown RBP8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 RPS4XP62701 263 aaKnown RBP8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 ARFRP1Q13795 201 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 ODF1Q14990 250 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 CNKSR3Q6P9H4 555 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 FBXL14Q8N1E6 418 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 FER1L6-AS1Q8NA97 138 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 OR2Z1Q8NG97 314 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 OR4S2Q8NH73 311 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 RHBDD1Q8TEB9 315 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 NEUROG1Q92886 237 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 SLAMF6Q96DU3 332 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 RYDENQ9NUL5 291 aaKnown RBP8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 WASHC3Q9Y3C0 194 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 INSL6Q9Y581 213 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 IGHV1-69-2A0A0G2JMI3 117 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 C2orf72A6NCS6 295 aa8.39□□□□□ -1.07
PTCHD4-201ENST00000339488 K7EQS6 105 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 230.3 ms