RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 RPUSD4Q96CM3 377 aaKnown RBP11.03□□□□□ -0.64
DFFB-202ENST00000339350 C20orf144Q9BQM9 153 aa11.03□□□□□ -0.64
DFFB-202ENST00000339350 ABHD6Q9BV23 337 aa11.03□□□□□ -0.64
DFFB-202ENST00000339350 SH3BGRL3Q9H299 93 aa11.03□□□□□ -0.64
DFFB-202ENST00000339350 CST9LQ9H4G1 147 aa11.03□□□□□ -0.64
DFFB-202ENST00000339350 URB1O60287 2271 aaKnown RBP11.02□□□□□ -0.64
DFFB-202ENST00000339350 WIPF3A6NGB9 483 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 P2RY10O00398 339 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 TNFSF13O75888 250 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 MMP9P14780 707 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 PRSS8Q16651 343 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 CKLFQ9UBR5 152 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 COLQQ9Y215 455 aaPredicted RBP11.02□□□□□ -0.65
DFFB-202ENST00000339350 RBFOX3A6NFN3 312 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 ZNF584Q8IVC4 421 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 ERGIC1Q969X5 290 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 PINX1Q96BK5 328 aaKnown RBP11.02□□□□□ -0.65
DFFB-202ENST00000339350 ZNF552Q9H707 407 aaPredicted RBP11.02□□□□□ -0.65
DFFB-202ENST00000339350 RYDENQ9NUL5 291 aaKnown RBP11.02□□□□□ -0.65
DFFB-202ENST00000339350 LIPGQ9Y5X9 500 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 TMEM14AQ9Y6G1 99 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 ASPMQ8IZT6 3477 aa11.02□□□□□ -0.65
DFFB-202ENST00000339350 NCOR1O75376 2440 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 PPP5D1E7EU14 171 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 CLDN34H7C241 214 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 NUDT21O43809 227 aaKnown RBP11.01□□□□□ -0.65
DFFB-202ENST00000339350 TNFP01375 233 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 SRP19P09132 144 aaKnown RBP11.01□□□□□ -0.65
DFFB-202ENST00000339350 PI3P19957 117 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 RND3P61587 244 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 SPEM2Q0P670 501 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 FUT7Q11130 342 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 ENDOGQ14249 297 aaKnown RBP11.01□□□□□ -0.65
DFFB-202ENST00000339350 ZNF260Q3ZCT1 412 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 FNDC7Q5VTL7 733 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 MYO7BQ6PIF6 2116 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 C16orf47Q6ZP98 133 aaPredicted RBP11.01□□□□□ -0.65
DFFB-202ENST00000339350 SYT13Q7L8C5 426 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 TRAPPC6BQ86SZ2 158 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 CPT1CQ8TCG5 803 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 IL22RA2Q969J5 263 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 ZNF581Q9P0T4 197 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 ZNF319Q9P2F9 582 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 TOMM40O96008 361 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 POU2F2P09086 479 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 GNB3P16520 340 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 GABRG2P18507 467 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 GFERP55789 205 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 SLC18B1Q6NT16 456 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 ERASQ7Z444 233 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 DYRK2Q92630 601 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 LOC107986453A0A1B0GWG9 222 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 PRSS37A4D1T9 235 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 C2CD4DB7Z1M9 353 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 HRH1P35367 487 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 SSBP1Q04837 148 aaKnown RBP11.01□□□□□ -0.65
DFFB-202ENST00000339350 CLEC12BQ2HXU8 276 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 SHISA6Q6ZSJ9 500 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 ARHGEF39Q8N4T4 335 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 OR2I1PQ8NGU4 316 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 RNF128Q8TEB7 428 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 PTPMT1Q8WUK0 201 aaPredicted RBP11.01□□□□□ -0.65
DFFB-202ENST00000339350 MS4A10Q96PG2 267 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 GABRG3Q99928 467 aa11.01□□□□□ -0.65
DFFB-202ENST00000339350 IGHV2-70DA0A0C4DH43 119 aa11□□□□□ -0.65
DFFB-202ENST00000339350 FOXF1Q12946 379 aa11□□□□□ -0.65
DFFB-202ENST00000339350 TMEM241Q24JQ0 296 aa11□□□□□ -0.65
DFFB-202ENST00000339350 FAM166AQ6J272 317 aa11□□□□□ -0.65
DFFB-202ENST00000339350 ZNF738Q8NE65 137 aa11□□□□□ -0.65
DFFB-202ENST00000339350 MARCH1Q8TCQ1 289 aa11□□□□□ -0.65
DFFB-202ENST00000339350 ZNF701Q9NV72 531 aaPredicted RBP11□□□□□ -0.65
DFFB-202ENST00000339350 BGLAPP02818 100 aa11□□□□□ -0.65
DFFB-202ENST00000339350 GAPDHP04406 335 aaKnown RBP11□□□□□ -0.65
DFFB-202ENST00000339350 CD55P08174 381 aa11□□□□□ -0.65
DFFB-202ENST00000339350 APOBEC1P41238 236 aaKnown RBP11□□□□□ -0.65
DFFB-202ENST00000339350 ARRB1P49407 418 aaPredicted RBP11□□□□□ -0.65
DFFB-202ENST00000339350 CPEB4Q17RY0 729 aaKnown RBP eCLIP11□□□□□ -0.65
DFFB-202ENST00000339350 OPN5Q6U736 354 aa11□□□□□ -0.65
DFFB-202ENST00000339350 TMEM182Q6ZP80 229 aaPredicted RBP11□□□□□ -0.65
DFFB-202ENST00000339350 ADGRE4PQ86SQ3 457 aa11□□□□□ -0.65
DFFB-202ENST00000339350 FGGYQ96C11 551 aa11□□□□□ -0.65
DFFB-202ENST00000339350 LOXL4Q96JB6 756 aa11□□□□□ -0.65
DFFB-202ENST00000339350 ZNF479Q96JC4 524 aa11□□□□□ -0.65
DFFB-202ENST00000339350 NUDT9Q9BW91 350 aa11□□□□□ -0.65
DFFB-202ENST00000339350 FOXQ1Q9C009 403 aa11□□□□□ -0.65
DFFB-202ENST00000339350 COX11Q9Y6N1 276 aa11□□□□□ -0.65
DFFB-202ENST00000339350 TRBV24-1A0A075B6N3 115 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 IGKV1D-43A0A0B4J1Z2 117 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 TNFRSF4P43489 277 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 HLA-DRB3P79483 266 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 PRTGQ2VWP7 1150 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 PTCRAQ6ISU1 281 aaPredicted RBP10.99□□□□□ -0.65
DFFB-202ENST00000339350 NECAP1Q8NC96 275 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 OR2AJ1Q8NGZ0 328 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 C8orf44Q96CB5 159 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 NICN1Q9BSH3 213 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 ANGPTL4Q9BY76 406 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 MEGF9Q9H1U4 602 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 RBKSQ9H477 322 aa10.99□□□□□ -0.65
DFFB-202ENST00000339350 A0A1B0GUS0 222 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms