RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 C21orf140B9A014 251 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 TERTO14746 1132 aaKnown RBP16.26■□□□□ 0.19
PSPC1-201ENST00000338910 RRP8O43159 456 aaKnown RBP16.26■□□□□ 0.19
PSPC1-201ENST00000338910 XRCC2O43543 280 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BKO60814 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BJP06899 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 CXCL1P09341 107 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BOP23527 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BBP33778 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BDP58876 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BCP62807 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST2H2BEQ16778 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.26■□□□□ 0.19
PSPC1-201ENST00000338910 SSX9Q7RTT3 188 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 ZIC4Q8N9L1 334 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 FAM213BQ8TBF2 198 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BHQ93079 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 RAB39BQ96DA2 213 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BNQ99877 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 HIST1H2BMQ99879 126 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 A0A087WWC5 75 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 PINLYPA6NC86 204 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 LRRC3CA6NJW4 275 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 GJE1A6NN92 205 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 H3BQ15 152 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 DIRAS3O95661 229 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 CARD18P57730 90 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 ZNF674Q2M3X9 581 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 DNLZQ5SXM8 178 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 ZNF343Q6P1L6 599 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 CRIP3Q6Q6R5 217 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 ZNF283Q8N7M2 679 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 TMEM54Q969K7 222 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 ZNF837Q96EG3 531 aaPredicted RBP16.26■□□□□ 0.19
PSPC1-201ENST00000338910 ZNF701Q9NV72 531 aaPredicted RBP16.26■□□□□ 0.19
PSPC1-201ENST00000338910 IL17BQ9UHF5 180 aa16.26■□□□□ 0.19
PSPC1-201ENST00000338910 TMEM182Q6ZP80 229 aaPredicted RBP16.25■□□□□ 0.19
PSPC1-201ENST00000338910 FAM57BQ71RH2 274 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 TMEM123Q8N131 208 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 OR5D18Q8NGL1 313 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 SPOCK3Q9BQ16 436 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 NCOA6Q14686 2063 aaPredicted RBP16.25■□□□□ 0.19
PSPC1-201ENST00000338910 MSR1P21757 451 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 CCL1P22362 96 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 RAC3P60763 192 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 NHLH2Q02577 135 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 DMRTC1Q5HYR2 192 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 REC114Q7Z4M0 266 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 HIST3H2BBQ8N257 126 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 SNIP1Q8TAD8 396 aaKnown RBP16.25■□□□□ 0.19
PSPC1-201ENST00000338910 S100PBPQ96BU1 408 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 LRFN1Q9P244 771 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 MCTS1Q9ULC4 181 aaKnown RBP16.25■□□□□ 0.19
PSPC1-201ENST00000338910 ZNF292O60281 2723 aa16.25■□□□□ 0.19
PSPC1-201ENST00000338910 RIF1Q5UIP0 2472 aaKnown RBP16.25■□□□□ 0.19
PSPC1-201ENST00000338910 NCKAP5O14513 1909 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 DHHO43323 396 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 SOD3P08294 240 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 NR2C1P13056 603 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 GDF1P27539 372 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 TAGLN2P37802 199 aaKnown RBP16.24■□□□□ 0.19
PSPC1-201ENST00000338910 ALDH3B1P43353 468 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 ERVFRD-1P60508 538 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 CCL20P78556 96 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 PIP4P1Q86T03 277 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 RBM14Q96PK6 669 aaKnown RBP16.24■□□□□ 0.19
PSPC1-201ENST00000338910 GPR61Q9BZJ8 451 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 NELFAQ9H3P2 528 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 UNKLQ9H9P5 680 aaKnown RBP16.24■□□□□ 0.19
PSPC1-201ENST00000338910 KCNIP3Q9Y2W7 256 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 MED13Q9UHV7 2174 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 C5orf63A6NC05 138 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 RBFOX3A6NFN3 312 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 ZNF587BE7ETH6 402 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 HSD17B6O14756 317 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 CXCL13O43927 109 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 CA11O75493 328 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 NTF4P34130 210 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 LSM6P62312 80 aaKnown RBP16.24■□□□□ 0.19
PSPC1-201ENST00000338910 GAMTQ14353 236 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 TMEM187Q14656 261 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 KISS1Q15726 138 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 C10orf128Q5T292 105 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 GFI1BQ5VTD9 330 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 GGNQ86UU5 652 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 DEFB124Q8NES8 71 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 CPNE4Q96A23 557 aaPredicted RBP16.24■□□□□ 0.19
PSPC1-201ENST00000338910 ULBP2Q9BZM5 246 aa16.24■□□□□ 0.19
PSPC1-201ENST00000338910 OR5H15A6NDH6 313 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 CXorf65A6NEN9 183 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 E9PLN8 166 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 F5H5K5 113 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 STMND1H3BQB6 276 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 PPP1R2P9O14990 202 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 PIGPP57054 158 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 ENDOGQ14249 297 aaKnown RBP16.23■□□□□ 0.19
PSPC1-201ENST00000338910 UBE2V2Q15819 145 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 SP6Q3SY56 376 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 KHDC3LQ587J8 217 aa16.23■□□□□ 0.19
PSPC1-201ENST00000338910 DMRTC2Q8IXT2 367 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms