RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 TUSC2O75896 110 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 P2RY1P47900 373 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 CFHR1Q03591 330 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SPINK9Q5DT21 86 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SPATA46Q5T0L3 261 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 IL22RA1Q8N6P7 574 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 OR10AD1Q8NGE0 317 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SPACA9Q96E40 222 aaPredicted RBP12.31□□□□□ -0.44
PCDH8-201ENST00000338862 CDCA3Q99618 268 aaPredicted RBP12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SSX3Q99909 188 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 WASF3Q9UPY6 502 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 IGKV3D-11A0A0A0MRZ8 115 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 A0A1W2PPQ1 181 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SRSF10O75494 262 aaKnown RBP12.31□□□□□ -0.44
PCDH8-201ENST00000338862 CD5P06127 495 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 THBS4P35443 961 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 RPS23P62266 143 aaKnown RBP12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SPNS3Q6ZMD2 512 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 PP6455Q8WZ26 134 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 EXTL1Q92935 676 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SPIN2AQ99865 258 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 SPIN2BQ9BPZ2 258 aa12.31□□□□□ -0.44
PCDH8-201ENST00000338862 CRYM-AS1A6NIL9 109 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 CD300LBA8K4G0 201 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 MMP7P09237 267 aaPredicted RBP12.3□□□□□ -0.44
PCDH8-201ENST00000338862 CCL3P10147 92 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 G0S2P27469 103 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 CARD18P57730 90 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 FAM3AP98173 230 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 MRPL21Q7Z2W9 205 aaKnown RBP12.3□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF611Q8N823 705 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 OR6X1Q8NH79 312 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 LIME1Q9H400 295 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 OR14J1Q9UGF5 321 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 TSTD3H0UI37 97 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 DANCRP0C864 163 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 ERVS71-1P61550 626 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 HLA-CQ95604 372 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 LAMP3Q9UQV4 416 aa12.3□□□□□ -0.44
PCDH8-201ENST00000338862 CD63P08962 238 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 SCTP09683 121 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF17P17021 662 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 CYB5R2Q6BCY4 276 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 PI4KAP42356 2102 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 PPYP01298 95 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 TLE4Q04727 773 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 SURF2Q15527 256 aaPredicted RBP12.29□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF787Q6DD87 383 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 MRPL41Q8IXM3 137 aaKnown RBP12.29□□□□□ -0.44
PCDH8-201ENST00000338862 POC1BQ8TC44 478 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 CFHR5Q9BXR6 569 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 CHST5Q9GZS9 411 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF665Q9H7R5 613 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 SHISA7A6NL88 538 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 CLDN1O95832 211 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 GAMTQ14353 236 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 FAM210BQ96KR6 192 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 MTCH2Q9Y6C9 303 aa12.29□□□□□ -0.44
PCDH8-201ENST00000338862 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.28□□□□□ -0.44
PCDH8-201ENST00000338862 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.28□□□□□ -0.44
PCDH8-201ENST00000338862 C5orf49A4QMS7 147 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 C9J4A7 227 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 MPPED1O15442 326 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 SEC11BP0C7V7 166 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 PGA5P0DJD9 388 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 WIPI1Q5MNZ9 446 aaPredicted RBP12.28□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF501Q96CX3 271 aaPredicted RBP12.28□□□□□ -0.44
PCDH8-201ENST00000338862 IL36RNQ9UBH0 155 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 STRAPQ9Y3F4 350 aaKnown RBP12.28□□□□□ -0.44
PCDH8-201ENST00000338862 TIMM10BQ9Y5J6 103 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 TRANK1O15050 2925 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 TRBV6-7A0A0A0MS04 114 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 FOSL2P15408 326 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 GLB1P16278 677 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 GDF1P27539 372 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 CD200P41217 278 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF808Q8N4W9 903 aaPredicted RBP12.28□□□□□ -0.44
PCDH8-201ENST00000338862 PSMF1Q92530 271 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 FAM234AQ9H0X4 552 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 IGSF23A1L1A6 192 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 P04436 131 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 CXCL1P09341 107 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 SLC25A47Q6Q0C1 308 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 TMEM252Q8N6L7 170 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 OR5B12Q96R08 314 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 SLC39A9Q9NUM3 307 aa12.28□□□□□ -0.44
PCDH8-201ENST00000338862 ERRFI1Q9UJM3 462 aaPredicted RBP12.28□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.44
PCDH8-201ENST00000338862 TRAPPC2LH3BP13 241 aa12.27□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF705DP0CH99 300 aaPredicted RBP12.27□□□□□ -0.44
PCDH8-201ENST00000338862 ZNF705BP0CI00 300 aaPredicted RBP12.27□□□□□ -0.44
PCDH8-201ENST00000338862 CCL7P80098 99 aa12.27□□□□□ -0.44
PCDH8-201ENST00000338862 TMEM187Q14656 261 aa12.27□□□□□ -0.44
PCDH8-201ENST00000338862 MKXQ8IYA7 352 aa12.27□□□□□ -0.44
PCDH8-201ENST00000338862 C1orf147Q96MC9 270 aaPredicted RBP12.27□□□□□ -0.44
PCDH8-201ENST00000338862 PLEKHF2Q9H8W4 249 aa12.27□□□□□ -0.44
PCDH8-201ENST00000338862 FRYLO94915 3013 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms