RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ABHD14AQ9BUJ0 271 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 PLA2G2FQ9BZM2 168 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 TIMM10BQ9Y5J6 103 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 TNFRSF9Q07011 255 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 OSR2Q8N2R0 312 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 LYRM2Q9NU23 88 aaPredicted RBP11.66□□□□□ -0.54
COL2A1-201ENST00000337299 VAX2Q9UIW0 290 aa11.66□□□□□ -0.54
COL2A1-201ENST00000337299 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 GRIFINA4D1Z8 144 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 LAMTOR5O43504 91 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 APLNRP35414 380 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 GLIPR1P48060 266 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 CXCL12P48061 93 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 EDDM3BP56851 147 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 KIR2DS1Q14954 304 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF141Q15928 474 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 SPINK9Q5DT21 86 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 FFAR4Q5NUL3 377 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 THEM4Q5T1C6 240 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 PTCRAQ6ISU1 281 aaPredicted RBP11.65□□□□□ -0.54
COL2A1-201ENST00000337299 TMEM252Q8N6L7 170 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 NANOS1Q8WY41 292 aaKnown RBP11.65□□□□□ -0.54
COL2A1-201ENST00000337299 AQP3Q92482 292 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 MFRPQ9BY79 579 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 DNAJC4Q9NNZ3 241 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 RNF212BA8MTL3 300 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 EML2O95834 649 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 CXCL1P09341 107 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 TFPI2P48307 235 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 ERVK-16P61578 105 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 FOXF1Q12946 379 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 CXorf66Q5JRM2 361 aaPredicted RBP11.65□□□□□ -0.54
COL2A1-201ENST00000337299 OR1K1Q8NGR3 316 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 PCNTO95613 3336 aa11.65□□□□□ -0.54
COL2A1-201ENST00000337299 J3QRE1 110 aa11.65□□□□□ -0.55
COL2A1-201ENST00000337299 RAB29O14966 203 aa11.65□□□□□ -0.55
COL2A1-201ENST00000337299 MRPS21P82921 87 aaKnown RBP11.65□□□□□ -0.55
COL2A1-201ENST00000337299 MYBPHQ13203 477 aa11.65□□□□□ -0.55
COL2A1-201ENST00000337299 MRGPRX1Q96LB2 322 aa11.65□□□□□ -0.55
COL2A1-201ENST00000337299 SPOCK3Q9BQ16 436 aa11.65□□□□□ -0.55
COL2A1-201ENST00000337299 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.55
COL2A1-201ENST00000337299 ZNF814B7Z6K7 855 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 DUX1O43812 170 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 BCL2P10415 239 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 GABRA2P47869 451 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 ARSJQ5FYB0 599 aaPredicted RBP11.64□□□□□ -0.55
COL2A1-201ENST00000337299 MRPL30Q8TCC3 161 aaKnown RBP11.64□□□□□ -0.55
COL2A1-201ENST00000337299 FAM60AQ9NP50 221 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 C19orf25Q9UFG5 118 aaPredicted RBP11.64□□□□□ -0.55
COL2A1-201ENST00000337299 ANK1P16157 1881 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 PAGE4O60829 102 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 Q6ZS52 159 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 ERASQ7Z444 233 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 TBC1D26Q86UD7 250 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 SLC24A4Q8NFF2 622 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.64□□□□□ -0.55
COL2A1-201ENST00000337299 VSTM2LQ96N03 204 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 ICE1Q9Y2F5 2266 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 CACNA1HO95180 2353 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 ZNF253O75346 499 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 TOX4O94842 621 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 TNFRSF4P43489 277 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 SLC38A11Q08AI6 406 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 VAX1Q5SQQ9 334 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 PRR27Q6MZM9 219 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 SLC35E3Q7Z769 313 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 TMEM183AQ8IXX5 376 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 TCTEX1D1Q8N7M0 179 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 UTP23Q9BRU9 249 aaKnown RBP11.64□□□□□ -0.55
COL2A1-201ENST00000337299 TMEM204Q9BSN7 226 aa11.64□□□□□ -0.55
COL2A1-201ENST00000337299 C17orf51A8MQB3 221 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 HEPN1Q6WQI6 88 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 APH1AQ96BI3 265 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 PINX1Q96BK5 328 aaKnown RBP11.63□□□□□ -0.55
COL2A1-201ENST00000337299 NEIL1Q96FI4 390 aaPredicted RBP11.63□□□□□ -0.55
COL2A1-201ENST00000337299 GALNT14Q96FL9 552 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 LOC102725191A0A1B0GVB3 256 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 ANKRD30BLA7E2S9 258 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 C9J4A7 227 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 HOXC12P31275 282 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 COL10A1Q03692 680 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 SGMS2Q8NHU3 365 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 NAT6Q93015 286 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 HIST1H2BLQ99880 126 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 MYLKQ15746 1914 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 PMS2P1A4D2B8 440 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 PLPP3O14495 311 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 FOLR2P14207 255 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 SLC35B1P78383 322 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 FZD5Q13467 585 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 ISXQ2M1V0 245 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 ABLIM2Q6H8Q1 611 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 CDPF1Q6NVV7 123 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 DEGS2Q6QHC5 323 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 AAED1Q7RTV5 226 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 PLXDC1Q8IUK5 500 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 OR10G4Q8NGN3 311 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 OR10G9Q8NGN4 311 aa11.63□□□□□ -0.55
COL2A1-201ENST00000337299 OR10G7Q8NGN6 311 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms