RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 MPGP29372 298 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 IL2RGP31785 369 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 PTGER4P35408 488 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 NDUFA6P56556 154 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 EDDM3BP56851 147 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 UBE2KP61086 200 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 ZNF816Q0VGE8 651 aaPredicted RBP7.17□□□□□ -1.26
HPS4-201ENST00000336873 CSRP2Q16527 193 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 RPUSD3Q6P087 351 aaKnown RBP7.17□□□□□ -1.26
HPS4-201ENST00000336873 WDR74Q6RFH5 385 aaPredicted RBP7.17□□□□□ -1.26
HPS4-201ENST00000336873 SKA3Q8IX90 412 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 LGI3Q8N145 548 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 OR5C1Q8NGR4 320 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 FGFBP3Q8TAT2 258 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 RPS4Y2Q8TD47 263 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 ERGIC1Q969X5 290 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 CCL28Q9NRJ3 127 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 SLC2A9Q9NRM0 540 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 SLC7A10Q9NS82 523 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 NSG2Q9Y328 171 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 EML6Q6ZMW3 1958 aa7.17□□□□□ -1.26
HPS4-201ENST00000336873 A0A1W2PPE2 198 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 METTL15P1P0C7V9 234 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 SPP1P10451 314 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 HOXB1P14653 301 aaPredicted RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 SUCLG1P53597 346 aaKnown RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 MAJINQ3KP22 176 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 NCMAPQ5T1S8 102 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 OR10V1Q8NGI7 309 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 AQP3Q92482 292 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 BOKQ9UMX3 212 aaPredicted RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 NKX2-6A6NCS4 301 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 SCAF4O95104 1147 aaKnown RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 TNFSF15O95150 251 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 HPP00738 406 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 CRYBA1P05813 215 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 FPR2P25090 351 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 TAGLN2P37802 199 aaKnown RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 LPAR6P43657 344 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 CEBPDP49716 269 aaPredicted RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 GSK3AP49840 483 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 EXT1Q16394 746 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 CXorf66Q5JRM2 361 aaPredicted RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 AVPI1Q5T686 147 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 CALHM1Q8IU99 346 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 TMEM105Q8N8V8 129 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 ZDHHC22Q8N966 263 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 CCDC71LQ8N9Z2 235 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 KIRREL1Q96J84 757 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 TCFL5Q9UL49 500 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 GPR132Q9UNW8 380 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 TIMM8BQ9Y5J9 83 aaPredicted RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 A0A1B0GTQ1 180 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 ZNF727A8MUV8 499 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 VAMP5O95183 116 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 BCL3P20749 454 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 RPL23AP62750 156 aaKnown RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 RAC1P63000 192 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 C6orf15Q6UXA7 325 aaPredicted RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 LDLRAD3Q86YD5 345 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 OR2V1Q8NHB1 315 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 RBMXL1Q96E39 390 aaKnown RBP7.16□□□□□ -1.26
HPS4-201ENST00000336873 IP6K3Q96PC2 410 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 CLCC1Q96S66 551 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 ZNF251Q9BRH9 671 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 FAM208BQ5VWN6 2430 aa7.16□□□□□ -1.26
HPS4-201ENST00000336873 SPTBN4Q9H254 2564 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 DEGS1O15121 323 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 OPN1MWP04001 364 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 OPN1MW2P0DN77 364 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 OPN1MW3P0DN78 364 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 LIFP15018 202 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 GAPTQ8N292 157 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 SLC30A7Q8NEW0 376 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 OR2Y1Q8NGV0 311 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 PP6455Q8WZ26 134 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 BSCL2Q96G97 398 aaPredicted RBP7.15□□□□□ -1.26
HPS4-201ENST00000336873 UNKLQ9H9P5 680 aaKnown RBP7.15□□□□□ -1.26
HPS4-201ENST00000336873 SLC17A5Q9NRA2 495 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 A0A1W2PPH5 198 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 SERPINE3A8MV23 424 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 CDIPTO14735 213 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 IFNA17P01571 189 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 H2AFB1P0C5Y9 115 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 ZNF735P0CB33 412 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 CALCRP30988 508 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 PJVKQ0ZLH3 352 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 ZNF154Q13106 437 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 PRDX4Q13162 271 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 KIAA0141Q14154 515 aaPredicted RBP7.15□□□□□ -1.26
HPS4-201ENST00000336873 OR1C1Q15619 314 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 GUK1Q16774 197 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 ACTBL2Q562R1 376 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 C1orf100Q5SVJ3 147 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 PRSS54Q6PEW0 395 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 KMT5CQ86Y97 462 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 SLC35G3Q8N808 338 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 OR10J5Q8NHC4 309 aa7.15□□□□□ -1.26
HPS4-201ENST00000336873 RNF166Q96A37 237 aaPredicted RBP7.15□□□□□ -1.26
HPS4-201ENST00000336873 OCSTAMPQ9BR26 566 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms