RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 APLNRP35414 380 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 UTF1Q5T230 341 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 CST9LQ9H4G1 147 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 PSG2P11465 335 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 SLC35E4Q6ICL7 350 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 HSD11B1LQ7Z5J1 315 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 LYG2Q86SG7 212 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 TBL2Q9Y4P3 447 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 WNK2Q9Y3S1 2297 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 TAF1P21675 1872 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 LINC00869P0C866 280 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 PSG1P11464 419 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 HOXB2P14652 356 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 IER3P46695 156 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 FBXL22Q6P050 247 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 RBPMS2Q6ZRY4 209 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 CELF2-AS1Q8N7Q2 184 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 C1orf162Q8NEQ5 155 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 PLPPR1Q8TBJ4 325 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 ALG14Q96F25 216 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 SMG9Q9H0W8 520 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 WRAP73Q9P2S5 460 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 SHANK1Q9Y566 2161 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 PPIAL4CA0A0B4J2A2 164 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 PPIAL4GP0DN37 164 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 TOB1P50616 345 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 SAMD5Q5TGI4 173 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 NANOGP8Q6NSW7 305 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 DTWD2Q8NBA8 298 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 TMEM255BQ8WV15 326 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 C10orf35Q96D05 121 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 LRP6O75581 1613 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 MED13LQ71F56 2210 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 NFASCO94856 1347 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 STARD6P59095 220 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 C1orf195Q5TG92 126 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF418Q8TF45 676 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 EPHX3Q9H6B9 360 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 GPR132Q9UNW8 380 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 COL1A2P08123 1366 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 APC2O95996 2303 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 KCNE1BA0A087WTH5 132 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 PRSS51A0A1B0GVH4 220 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 RBMY1BA6NDE4 496 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 RBMY1EA6NEQ0 496 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 J3KTA2 159 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 RBMY1DP0C7P1 496 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 RBMY1A1P0DJD3 496 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 RBMY1CP0DJD4 496 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 RACK1P63244 317 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 VMA21Q3ZAQ7 101 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 ARSIQ5FYB1 569 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 BTLAQ7Z6A9 289 aa5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF106Q9H2Y7 1883 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-201ENST00000334218 FUT6P51993 359 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 EFNB1P98172 346 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 GUCA2AQ02747 115 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 FMODQ06828 376 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 HYAL1Q12794 435 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 UNQ5815/PRO19632Q6UWF5 114 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 B3GNT8Q7Z7M8 397 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 APIPQ96GX9 242 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 IMMP2LQ96T52 175 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 GKN1Q9NS71 199 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 MRPS17Q9Y2R5 130 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 COL16A1Q07092 1604 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 DENND4AQ7Z401 1863 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 LOC102725191A0A1B0GVB3 256 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 MED19A0JLT2 244 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CD1DP15813 335 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 RBM3P98179 157 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF511Q8NB15 262 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 PPDPFLQ8WWR9 84 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 GALMQ96C23 342 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 HRASLS5Q96KN8 279 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 RIMS4Q9H426 269 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZFP64Q9NPA5 681 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CLN8Q9UBY8 286 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 FIGNL2A6NMB9 653 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 VEGFDO43915 354 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CD3EP07766 207 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 FZD5Q13467 585 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CALHM3Q86XJ0 350 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 VGLL2Q8N8G2 317 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 SDR39U1Q9NRG7 319 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 UTS2RQ9UKP6 389 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 TNFRSF18Q9Y5U5 241 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 DDAH2O95865 285 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 NMBRP28336 390 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CCKBRP32239 447 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ACVRL1P37023 503 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 CCL7P80098 99 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 VEZF1Q14119 521 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 LDLRAD1Q5T700 205 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 SFXN4Q6P4A7 337 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ZNF841Q6ZN19 808 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 LAX1Q8IWV1 398 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 TMEM123Q8N131 208 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 ARRDC2Q8TBH0 407 aa5.41□□□□□ -1.54
CDC42BPA-201ENST00000334218 MS4A6EQ96DS6 147 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms