RNA–Protein interactions for RNA: ENST00000333137.11

SMTN-201, Transcript of smoothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMTN, Length 3,295 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-201ENST00000333137 IMMP2LQ96T52 175 aa11.72□□□□□ -0.53
SMTN-201ENST00000333137 HDAC8Q9BY41 377 aa11.72□□□□□ -0.53
SMTN-201ENST00000333137 KLF4O43474 513 aa11.72□□□□□ -0.53
SMTN-201ENST00000333137 LIPFP07098 398 aa11.72□□□□□ -0.53
SMTN-201ENST00000333137 H2BFMP0C1H6 154 aa11.72□□□□□ -0.53
SMTN-201ENST00000333137 ZNF93P35789 620 aaPredicted RBP11.72□□□□□ -0.53
SMTN-201ENST00000333137 RPS27P42677 84 aaKnown RBP11.72□□□□□ -0.53
SMTN-201ENST00000333137 CMTM8Q8IZV2 173 aa11.72□□□□□ -0.53
SMTN-201ENST00000333137 LRFN3Q9BTN0 628 aa11.72□□□□□ -0.53
SMTN-201ENST00000333137 ZDHHC11Q9H8X9 412 aa11.72□□□□□ -0.53
SMTN-201ENST00000333137 ZNF106Q9H2Y7 1883 aaKnown RBP11.72□□□□□ -0.53
SMTN-201ENST00000333137 TMEM202A6NGA9 273 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 C1QTNF3-AMACRE9PGA6 284 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 SDCBPO00560 298 aaPredicted RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 HIST1H1CP16403 213 aaKnown RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 ALOX5APP20292 161 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 BCL6P41182 706 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 MRPL58Q14197 206 aaKnown RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 MRPL43Q8N983 215 aaKnown RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 PRSS16Q9NQE7 514 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 CLDND1Q9NY35 253 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 FBXL7Q9UJT9 491 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 VDAC3Q9Y277 283 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 ATG2BQ96BY7 2078 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 KIAA1671Q9BY89 1806 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 PPIAL4EA0A075B759 164 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 PPIAL4CA0A0B4J2A2 164 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 SPAARA0A1B0GVQ0 90 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 PRR32B1ATL7 298 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 PPIAL4DF5H284 164 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 SLC33A1O00400 549 aaPredicted RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 LINC01565O15544 149 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 PPIAL4FP0DN26 164 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 ZNF43P17038 809 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 PMCHP20382 165 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 PTGER4P35408 488 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 CCR2P41597 374 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 SCAND1P57086 179 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 PLP1P60201 277 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 CSNK2A1P68400 391 aaPredicted RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 MPV17L2Q567V2 206 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 FAM71F2Q6NXP2 309 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 HOGA1Q86XE5 327 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 SLC38A9Q8NBW4 561 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 CSNK2A3Q8NEV1 391 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 GLYATL1Q969I3 302 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 RBMXL1Q96E39 390 aaKnown RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 SCARF2Q96GP6 870 aaPredicted RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 GUCD1Q96NT3 240 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 RTBDNQ9BSG5 229 aaPredicted RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 ZNF665Q9H7R5 613 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 SCN2AQ99250 2005 aa11.71□□□□□ -0.53
SMTN-201ENST00000333137 TNRC18O15417 2968 aaPredicted RBP11.71□□□□□ -0.53
SMTN-201ENST00000333137 PLXNA3P51805 1871 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 IGLC7A0M8Q6 106 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 TRAPPC2LH3BP13 241 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 HMGN2P05204 90 aaKnown RBP11.71□□□□□ -0.54
SMTN-201ENST00000333137 GLI4P10075 376 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 SUPT4H1P63272 117 aaKnown RBP11.71□□□□□ -0.54
SMTN-201ENST00000333137 RUNX1Q01196 453 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 ZFP36L1Q07352 338 aaKnown RBP11.71□□□□□ -0.54
SMTN-201ENST00000333137 RAET1LQ5VY80 246 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 KCNIP4Q6PIL6 250 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 ZNF788Q6ZQV5 615 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 CPEB2Q7Z5Q1 589 aaKnown RBP11.71□□□□□ -0.54
SMTN-201ENST00000333137 MRPL24Q96A35 216 aaKnown RBP11.71□□□□□ -0.54
SMTN-201ENST00000333137 RSG1Q9BU20 258 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 CHRDL1Q9BU40 450 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.54
SMTN-201ENST00000333137 COL4A6Q14031 1691 aa11.71□□□□□ -0.54
SMTN-201ENST00000333137 LOC102723971A0A1B0GUV8 181 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 HBE1P02100 147 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 MPLP40238 635 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 HIST3H3Q16695 136 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 WDR82Q6UXN9 313 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 TCF23Q7RTU1 214 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 ZNF683Q8IZ20 524 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 ZNRF4Q8WWF5 429 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 ST6GALNAC6Q969X2 333 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 NMNAT3Q96T66 252 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 ARHGDIGQ99819 225 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 PDFQ9HBH1 243 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 DMRT3Q9NQL9 472 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 MMP17Q9ULZ9 603 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 NSG1A0A0A6YYJ2 146 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 SERINC4A6NH21 518 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 SOX1O00570 391 aaPredicted RBP11.7□□□□□ -0.54
SMTN-201ENST00000333137 TAX1BP3O14907 124 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 CCNOP22674 350 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 PPOXP50336 477 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
SMTN-201ENST00000333137 PHYHD1Q5SRE7 291 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 Q7L0L9 218 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 ADGRE4PQ86SQ3 457 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 COMMD2Q86X83 199 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 AP1S3Q96PC3 154 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 CALHM2Q9HA72 323 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 C1orf123Q9NWV4 160 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 CDC42EP3Q9UKI2 254 aa11.7□□□□□ -0.54
SMTN-201ENST00000333137 GPR132Q9UNW8 380 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms