RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 SLC33A1O00400 549 aaPredicted RBP11.48□□□□□ -0.57
LIMS1-201ENST00000332345 SC5DO75845 299 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 RBP4P02753 201 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 ZNF728P0DKX0 622 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 GTF2F2P13984 249 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 OR3A1P47881 315 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 ERVFRD-1P60508 538 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 EMX1Q04741 257 aaPredicted RBP11.48□□□□□ -0.57
LIMS1-201ENST00000332345 INSL4Q14641 139 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 DEFB112Q30KQ8 113 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 SLC22A6Q4U2R8 563 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 HSD17B12Q53GQ0 312 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 GLT8D1Q68CQ7 371 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 PHC2Q8IXK0 858 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 ZDHHC22Q8N966 263 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 FAM216AQ8WUB2 273 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 TNFRSF14Q92956 283 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 MUL1Q969V5 352 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 MRPS24Q96EL2 167 aaKnown RBP11.48□□□□□ -0.57
LIMS1-201ENST00000332345 ZNF48Q96MX3 618 aaPredicted RBP11.48□□□□□ -0.57
LIMS1-201ENST00000332345 NKX3-1Q99801 234 aaPredicted RBP11.48□□□□□ -0.57
LIMS1-201ENST00000332345 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
LIMS1-201ENST00000332345 MRPS28Q9Y2Q9 187 aaKnown RBP11.48□□□□□ -0.57
LIMS1-201ENST00000332345 SOX21Q9Y651 276 aaPredicted RBP11.48□□□□□ -0.57
LIMS1-201ENST00000332345 LINC00312Q9Y6C7 94 aa11.48□□□□□ -0.57
LIMS1-201ENST00000332345 C17orf98A8MV24 154 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 NPFFO15130 113 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 RRP9O43818 475 aaKnown RBP11.47□□□□□ -0.57
LIMS1-201ENST00000332345 ARL6IP5O75915 188 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 CSN2P05814 226 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 UCHL1P09936 223 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 CCL3L1P16619 93 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 SERPINA2P20848 420 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 P2RX3P56373 397 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 AESQ08117 197 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 ZNF273Q14593 569 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 NHLRC3Q5JS37 347 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 FAM27D1Q5T7N8 215 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 GLIPR1L1Q6UWM5 242 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 Q6YL49 198 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 LINC00596Q86U02 117 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 C11orf42Q8N5U0 333 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 SPATA3Q8NHX4 192 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 SLC25A28Q96A46 364 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 ZNF714Q96N38 554 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 C19orf24Q9BVV8 132 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 BARHL1Q9BZE3 327 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 PPA2Q9H2U2 334 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 ESM1Q9NQ30 184 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 GHRLQ9UBU3 117 aa11.47□□□□□ -0.57
LIMS1-201ENST00000332345 UBE2J1Q9Y385 318 aaPredicted RBP11.47□□□□□ -0.57
LIMS1-201ENST00000332345 TRGV10A0A0A0MS01 117 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 CLDN34H7C241 214 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 GABRA5P31644 462 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 KCNJ3P48549 501 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 GP2P55259 537 aaKnown RBP11.46□□□□□ -0.57
LIMS1-201ENST00000332345 DLX1P56177 255 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 RBM11P57052 281 aaKnown RBP11.46□□□□□ -0.57
LIMS1-201ENST00000332345 RPS25P62851 125 aaKnown RBP11.46□□□□□ -0.57
LIMS1-201ENST00000332345 UBA52P62987 128 aaKnown RBP11.46□□□□□ -0.57
LIMS1-201ENST00000332345 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.57
LIMS1-201ENST00000332345 KLRD1Q13241 179 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 PIGYQ3MUY2 71 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 PAN3Q58A45 887 aaKnown RBP11.46□□□□□ -0.57
LIMS1-201ENST00000332345 KRBOX4Q5JUW0 171 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 AWAT2Q6E213 333 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 TMEM91Q6ZNR0 172 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 TRAPPC6BQ86SZ2 158 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 SPARTQ8N0X7 666 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 TPRX1Q8N7U7 411 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 ZNF565Q8N9K5 539 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 OR13D1Q8NGV5 346 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 FCGR1BQ92637 280 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 CORO2AQ92828 525 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 IFT22Q9H7X7 185 aa11.46□□□□□ -0.57
LIMS1-201ENST00000332345 TRAV24A0A0B4J272 114 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 A0A0U1RQK1 487 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 MDFIC2A0A1B0GVS7 189 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 A0A1W2PRD5 423 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 A0A1W2PRF3 423 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 A0A1W2PRM7 423 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 MEIOCA2RUB1 952 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 DNAJC9-AS1A6NH13 148 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 H3BUI4 141 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 OR7C1O76099 320 aaPredicted RBP11.45□□□□□ -0.58
LIMS1-201ENST00000332345 PAHP00439 452 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 FBP1P09467 338 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 UBBP0CG47 229 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 RANBP1P43487 201 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 GLIPR1P48060 266 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 DLX6P56179 175 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 LGALS4P56470 323 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 SLC9A3R2Q15599 337 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 MPV17LQ2QL34 196 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 MIDNQ504T8 468 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 LRRTM1Q86UE6 522 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 LYPD6Q86Y78 171 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 OR4D6Q8NGJ1 314 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 PPIL3Q9H2H8 161 aaKnown RBP11.45□□□□□ -0.58
LIMS1-201ENST00000332345 GAL3ST2Q9H3Q3 398 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms