RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 PRAMEF5Q5TYX0 476 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 PRAMEF6Q5VXH4 476 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 OR5M8Q8NGP6 311 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 OR5B12Q96R08 314 aa8.27□□□□□ -1.09
SS18L1-201ENST00000331758 OPN3Q9H1Y3 402 aaPredicted RBP8.27□□□□□ -1.09
SS18L1-201ENST00000331758 HEATR1Q9H583 2144 aaKnown RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 E5RGE8 158 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 MPPED1O15442 326 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 KRASP01116 189 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 AADACP22760 399 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 CEACAM6P40199 344 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 F2RL1P55085 397 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 RAB31Q13636 194 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 INO80CQ6PI98 192 aaPredicted RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 RBMXL1Q96E39 390 aaKnown RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 TMEM231Q9H6L2 316 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 ZNF629Q9UEG4 869 aaPredicted RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 VSIG4Q9Y279 399 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 NSG2Q9Y328 171 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 IGHV3-43A0A0B4J1X8 118 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 CST7O76096 145 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 IGHV3-43DP0DP04 118 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 PRF1P14222 555 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 OR3A1P47881 315 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 PEA15Q15121 130 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 PDLIM3Q53GG5 364 aaPredicted RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 TMEM108Q6UXF1 575 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 ZFP62Q8NB50 900 aaPredicted RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 CLRN3Q8NCR9 226 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 PHYHIPLQ96FC7 376 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 CNTNAP3Q9BZ76 1288 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 NKX6-2Q9C056 277 aaPredicted RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 RYDENQ9NUL5 291 aaKnown RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 MED9Q9NWA0 146 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 LRP5LA4QPB2 252 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 J3QT63 122 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 NEURL1O76050 574 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 PTGDSP41222 190 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 ZNF816Q0VGE8 651 aaPredicted RBP8.26□□□□□ -1.09
SS18L1-201ENST00000331758 GGNBP1Q5YKI7 109 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 C1QL2Q7Z5L3 287 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 SLC25A42Q86VD7 318 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 STPG2Q8N412 459 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 MRGPRDQ8TDS7 321 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 ZNF524Q96C55 264 aa8.26□□□□□ -1.09
SS18L1-201ENST00000331758 JTBO76095 146 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 SNRNP70P08621 437 aaKnown RBP8.25□□□□□ -1.09
SS18L1-201ENST00000331758 ASCL1P50553 236 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 LGALSLQ3ZCW2 172 aaPredicted RBP8.25□□□□□ -1.09
SS18L1-201ENST00000331758 BOD1Q96IK1 185 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 RAB18Q9NP72 206 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 A0A0B4J293 547 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 TNFSF10P50591 281 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 FAM3AP98173 230 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 FHL1Q13642 323 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 HOGA1Q86XE5 327 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 C1orf87Q8N0U7 546 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 OR2G3Q8NGZ4 309 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 CXorf58Q96LI9 332 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 LINC00052Q96N35 136 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 SOSTQ9BQB4 213 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 NAA60Q9H7X0 242 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 LIN7CQ9NUP9 197 aaKnown RBP8.25□□□□□ -1.09
SS18L1-201ENST00000331758 A0A1B0GTI1 187 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 A0A1W2PPV4 95 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 LRRC3CA6NJW4 275 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 HEXAP06865 529 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 Q0VFX4 171 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 FAM185AQ8N0U4 392 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 PIK3IP1Q96FE7 263 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 FN3KRPQ9HA64 309 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 ZNF107Q9UII5 783 aaPredicted RBP8.25□□□□□ -1.09
SS18L1-201ENST00000331758 LIPGQ9Y5X9 500 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 PRR33A8MZF0 331 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 E9PQ18 207 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 CDX4O14627 284 aaPredicted RBP8.25□□□□□ -1.09
SS18L1-201ENST00000331758 BCL2L11O43521 198 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 ZBTB25P24278 435 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 HOXA1P49639 335 aaPredicted RBP8.25□□□□□ -1.09
SS18L1-201ENST00000331758 RBM11P57052 281 aaKnown RBP8.25□□□□□ -1.09
SS18L1-201ENST00000331758 RPP30P78346 268 aaKnown RBP8.25□□□□□ -1.09
SS18L1-201ENST00000331758 BAXQ07812 192 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 DCAF12L2Q5VW00 463 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 OR10S1Q8NGN2 331 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 OR1S2Q8NGQ3 325 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 CCL17Q92583 94 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 CXXC4Q9H2H0 198 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 PLEKHA2Q9HB19 425 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 ZNF319Q9P2F9 582 aa8.25□□□□□ -1.09
SS18L1-201ENST00000331758 TXNL1O43396 289 aa8.24□□□□□ -1.09
SS18L1-201ENST00000331758 SYNGR1O43759 233 aa8.24□□□□□ -1.09
SS18L1-201ENST00000331758 PPYP01298 95 aa8.24□□□□□ -1.09
SS18L1-201ENST00000331758 UCP2P55851 309 aa8.24□□□□□ -1.09
SS18L1-201ENST00000331758 TNFAIP6P98066 277 aaPredicted RBP8.24□□□□□ -1.09
SS18L1-201ENST00000331758 UNC119Q13432 240 aa8.24□□□□□ -1.09
SS18L1-201ENST00000331758 AVPI1Q5T686 147 aa8.24□□□□□ -1.09
SS18L1-201ENST00000331758 TMEM182Q6ZP80 229 aaPredicted RBP8.24□□□□□ -1.09
SS18L1-201ENST00000331758 TMEM123Q8N131 208 aa8.24□□□□□ -1.09
SS18L1-201ENST00000331758 OR1K1Q8NGR3 316 aa8.24□□□□□ -1.09
SS18L1-201ENST00000331758 EDARADDQ8WWZ3 215 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms