RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 SEMA5BQ9P283 1151 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 B3GAT1Q9P2W7 334 aa15.72■□□□□ 0.11
CLSTN3-202ENST00000331148 LOC102723971A0A1B0GUV8 181 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 ZNF732B4DXR9 585 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 EREGO14944 169 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 PHF1O43189 567 aaPredicted RBP15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 AMBPP02760 352 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 PNLIPP16233 465 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 NOXO1Q8NFA2 376 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 OR11L1Q8NGX0 322 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 OR6X1Q8NH79 312 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 HAS2Q92819 552 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 Q96M66 194 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 DDA1Q9BW61 102 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 CDH20Q9HBT6 801 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 UNC13CQ8NB66 2214 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 ONECUT2O95948 504 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 CYB5R3P00387 301 aaPredicted RBP15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 FOLR1P15328 257 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 NOVA1P51513 510 aaKnown RBP15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 H3F3AP84243 136 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 TAF9Q16594 264 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 CPEB2Q7Z5Q1 589 aaKnown RBP15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 FAAP24Q9BTP7 215 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 ACTR3CQ9C0K3 210 aaPredicted RBP15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 CALHM2Q9HA72 323 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 GLRX2Q9NS18 164 aa15.71■□□□□ 0.11
CLSTN3-202ENST00000331148 TRBV24-1A0A075B6N3 115 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 A0A1B0GU03 582 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 A0A1W2PNV4 684 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 C2orf72A6NCS6 295 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 LIPT2A6NK58 231 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 EFNA3P52797 238 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 FAM90A2PQ658T7 463 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 OR5L2Q8NGL0 311 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 CA5BP1Q8WTZ4 195 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 ST8SIA1Q92185 356 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 PIGTQ969N2 578 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 GNPNAT1Q96EK6 184 aaPredicted RBP15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 PGAM5Q96HS1 289 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 PLEKHF2Q9H8W4 249 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 ALKBH4Q9NXW9 302 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 DKKL1Q9UK85 242 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 ASXL3Q9C0F0 2248 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 H3BML4 177 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 HBE1P02100 147 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 PGA3P0DJD8 388 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 COX5BP10606 129 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 FAHP16930 419 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 RUNX1Q01196 453 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 MEX3BQ6ZN04 569 aaKnown RBP15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 KMT5CQ86Y97 462 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 OR5C1Q8NGR4 320 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 DDIT4LQ96D03 193 aa15.7■□□□□ 0.1
CLSTN3-202ENST00000331148 NKX2-6A6NCS4 301 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 ANKUB1A6NFN9 424 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 H3BMH7 237 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 CYTIPO60759 359 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 IL18BPO95998 194 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 EPHA1P21709 976 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 MDKP21741 143 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 DTYMKP23919 212 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 APLNRP35414 380 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 TLE4Q04727 773 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 PNRC1Q12796 327 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 FOXF1Q12946 379 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 RABEPKQ7Z6M1 372 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 TMEM252Q8N6L7 170 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 SUMF1Q8NBK3 374 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 OR4X1Q8NH49 305 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 TP53RKQ96S44 253 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 SYT3Q9BQG1 590 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 ANGPTL4Q9BY76 406 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 HIPK2Q9H2X6 1198 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 LYRM2Q9NU23 88 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 OR14J1Q9UGF5 321 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 RP1P56715 2156 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 CDS2O95674 445 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 IGLV3-1P01715 115 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 IGHG1P01857 330 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 NKX2-1P43699 371 aaPredicted RBP15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 RAB11AP62491 216 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 GRB2P62993 217 aaKnown RBP15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 CARD17Q5XLA6 110 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 GUSBP11Q6P575 273 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 CMTM1Q8IZ96 169 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 ZNF441Q8N8Z8 693 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 ZNF581Q9P0T4 197 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 COPS7AQ9UBW8 275 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 VDAC3Q9Y277 283 aa15.69■□□□□ 0.1
CLSTN3-202ENST00000331148 MUC3AQ02505 3323 aa15.68■□□□□ 0.1
CLSTN3-202ENST00000331148 ZDBF2Q9HCK1 2354 aa15.68■□□□□ 0.1
CLSTN3-202ENST00000331148 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.68■□□□□ 0.1
CLSTN3-202ENST00000331148 FAM221AA4D161 298 aa15.68■□□□□ 0.1
CLSTN3-202ENST00000331148 PATE3B3GLJ2 98 aa15.68■□□□□ 0.1
CLSTN3-202ENST00000331148 SHISA8B8ZZ34 492 aa15.68■□□□□ 0.1
CLSTN3-202ENST00000331148 PROB1E7EW31 1015 aa15.68■□□□□ 0.1
CLSTN3-202ENST00000331148 SSSCA1O60232 199 aa15.68■□□□□ 0.1
CLSTN3-202ENST00000331148 DYNLT3P51808 116 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms