RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PHYHD1Q5SRE7 291 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 ABHD5Q8WTS1 349 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 FAM210BQ96KR6 192 aa12.52□□□□□ -0.41
SNX20-202ENST00000330943 CDS2O95674 445 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 PKIAP61925 76 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 CXorf66Q5JRM2 361 aaPredicted RBP12.51□□□□□ -0.41
SNX20-202ENST00000330943 HIST2H3PS2Q5TEC6 136 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 SLC35E3Q7Z769 313 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 DMRTC2Q8IXT2 367 aaPredicted RBP12.51□□□□□ -0.41
SNX20-202ENST00000330943 OR13D1Q8NGV5 346 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 CLDND2Q8NHS1 167 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 TRDCB7Z8K6 153 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 ST8SIA5O15466 376 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 PNLIPP16233 465 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 HLA-DRB3P79483 266 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 COL19A1Q14993 1142 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 SLC25A31Q9H0C2 315 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
SNX20-202ENST00000330943 UBE2J1Q9Y385 318 aaPredicted RBP12.51□□□□□ -0.41
SNX20-202ENST00000330943 SHISA7A6NL88 538 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 AQP7P3A6NL99 342 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 MPPED1O15442 326 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 MSX1P28360 303 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 ANKRD37Q7Z713 158 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 ZNF695Q8IW36 515 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 CMTM1Q8IZ96 169 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 C1orf87Q8N0U7 546 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 TMEM123Q8N131 208 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 PACRGQ96M98 296 aaPredicted RBP12.51□□□□□ -0.41
SNX20-202ENST00000330943 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
SNX20-202ENST00000330943 RBM24Q9BX46 236 aaKnown RBP12.51□□□□□ -0.41
SNX20-202ENST00000330943 FAM186AA6NE01 2351 aa12.51□□□□□ -0.41
SNX20-202ENST00000330943 OR2J2O76002 312 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 JMJD7P0C870 316 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 NDUFB7P17568 137 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 PTGDSP41222 190 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 CFHR1Q03591 330 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 NFAM1Q8NET5 270 aaPredicted RBP12.5□□□□□ -0.41
SNX20-202ENST00000330943 SPSB1Q96BD6 273 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 GNPNAT1Q96EK6 184 aaPredicted RBP12.5□□□□□ -0.41
SNX20-202ENST00000330943 SNX22Q96L94 193 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 GPHA2Q96T91 129 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 TMEM222Q9H0R3 208 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 SMOC1Q9H4F8 434 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 FGF21Q9NSA1 209 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 TCFL5Q9UL49 500 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 ZNF732B4DXR9 585 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 ADAM20O43506 726 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 PPYP01298 95 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 CD200P41217 278 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 RAB11AP62491 216 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 TLE4Q04727 773 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 SPIN3Q5JUX0 258 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 DPPA2Q7Z7J5 298 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 ZNF100Q8IYN0 542 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 SMRP1Q8NCR6 262 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 M1APQ8TC57 530 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 CPNE4Q96A23 557 aaPredicted RBP12.5□□□□□ -0.41
SNX20-202ENST00000330943 RBMXL1Q96E39 390 aaKnown RBP12.5□□□□□ -0.41
SNX20-202ENST00000330943 BORCS8Q96FH0 119 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 CALHM2Q9HA72 323 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
SNX20-202ENST00000330943 IGHV3-15A0A0B4J1V0 119 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 SLC31A2O15432 143 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 UCP3P55916 312 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 ZNF154Q13106 437 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 Q6ZPA2 131 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 BATF2Q8N1L9 274 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 C10orf35Q96D05 121 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 IGKV1-12A0A0C4DH73 117 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 IGKV1D-12P01611 117 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 PGA5P0DJD9 388 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 FUT3P21217 361 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 MDKP21741 143 aaPredicted RBP12.49□□□□□ -0.41
SNX20-202ENST00000330943 OTX1P32242 354 aaPredicted RBP12.49□□□□□ -0.41
SNX20-202ENST00000330943 PI4KAP42356 2102 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 SHBQ15464 509 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 C17orf82Q86X59 251 aaPredicted RBP12.49□□□□□ -0.41
SNX20-202ENST00000330943 ODF3L1Q8IXM7 274 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 C17orf78Q8N4C9 275 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 OR2M3Q8NG83 312 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 SPTSSAQ969W0 71 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 NABP1Q96AH0 204 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 SPIN2AQ99865 258 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 SPIN2BQ9BPZ2 258 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 CRLF2Q9HC73 371 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 ST3GAL6Q9Y274 331 aa12.49□□□□□ -0.41
SNX20-202ENST00000330943 IGHV1OR21-1A0A087WYE8 117 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 SMCO3A2RU48 225 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 TMEM50AO95807 157 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 HBE1P02100 147 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 SRPXP78539 464 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 SP5Q6BEB4 398 aaPredicted RBP12.48□□□□□ -0.41
SNX20-202ENST00000330943 DBX2Q6ZNG2 339 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 TBC1D26Q86UD7 250 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 OSR2Q8N2R0 312 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 RNASE11Q8TAA1 199 aaKnown RBP12.48□□□□□ -0.41
SNX20-202ENST00000330943 ZNF385AQ96PM9 386 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms