RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MUCL1Q96DR8 90 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 CXXC4Q9H2H0 198 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 PIGMQ9H3S5 423 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 SPACA1Q9HBV2 294 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 PRR13Q9NZ81 148 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 POLDIP2Q9Y2S7 368 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 EEF1E1-BLOC1S5C9J1V9 151 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 DEGS1O15121 323 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 GLAP06280 429 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 CTSDP07339 412 aaPredicted RBP14.38□□□□□ -0.11
DDX41-201ENST00000330503 ACAA1P09110 424 aaPredicted RBP14.38□□□□□ -0.11
DDX41-201ENST00000330503 NFYAP23511 347 aaPredicted RBP14.38□□□□□ -0.11
DDX41-201ENST00000330503 FCGR2CP31995 323 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 ZNF81P51508 661 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 ANKRD55Q3KP44 614 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 C20orf204Q6ZNR8 217 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 GTF3AQ92664 365 aaKnown RBP14.38□□□□□ -0.11
DDX41-201ENST00000330503 RDH5Q92781 318 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 DHRS9Q9BPW9 319 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 DPCDQ9BVM2 203 aaPredicted RBP14.38□□□□□ -0.11
DDX41-201ENST00000330503 FXYD6Q9H0Q3 95 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 MSL2Q9HCI7 577 aa14.38□□□□□ -0.11
DDX41-201ENST00000330503 SPTBN4Q9H254 2564 aa14.37□□□□□ -0.11
DDX41-201ENST00000330503 RP1L1Q8IWN7 2480 aaPredicted RBP14.37□□□□□ -0.11
DDX41-201ENST00000330503 A0A0B4J2A0 478 aa14.37□□□□□ -0.11
DDX41-201ENST00000330503 HMSDA8MTL9 139 aa14.37□□□□□ -0.11
DDX41-201ENST00000330503 SEC61A1P61619 476 aaKnown RBP14.37□□□□□ -0.11
DDX41-201ENST00000330503 SORDQ00796 357 aa14.37□□□□□ -0.11
DDX41-201ENST00000330503 LRP11Q86VZ4 500 aa14.37□□□□□ -0.11
DDX41-201ENST00000330503 Q8IYB0 196 aa14.37□□□□□ -0.11
DDX41-201ENST00000330503 SHPKQ9UHJ6 478 aa14.37□□□□□ -0.11
DDX41-201ENST00000330503 C14orf166Q9Y224 244 aaKnown RBP14.37□□□□□ -0.11
DDX41-201ENST00000330503 KNG1P01042 644 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 ZNF826PQ6ZT77 177 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 MRPL30Q8TCC3 161 aaKnown RBP14.36□□□□□ -0.11
DDX41-201ENST00000330503 NEK7Q8TDX7 302 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 TLNRD1Q9H1K6 362 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 SH3BGRL2Q9UJC5 107 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 TRBV6-6A0A0A6YYG2 114 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.36□□□□□ -0.11
DDX41-201ENST00000330503 NOS1APO75052 506 aaPredicted RBP14.36□□□□□ -0.11
DDX41-201ENST00000330503 MPC2O95563 127 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 SCTP09683 121 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 ZNF728P0DKX0 622 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 GMFBP60983 142 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 NKX6-1P78426 367 aaPredicted RBP14.36□□□□□ -0.11
DDX41-201ENST00000330503 RGS7BPQ6MZT1 257 aaPredicted RBP14.36□□□□□ -0.11
DDX41-201ENST00000330503 MRGPRGQ86SM5 289 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 ELMOD3Q96FG2 381 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 CLEC4MQ9H2X3 399 aaPredicted RBP14.36□□□□□ -0.11
DDX41-201ENST00000330503 HES4Q9HCC6 221 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 SHANK1Q9Y566 2161 aa14.36□□□□□ -0.11
DDX41-201ENST00000330503 RFPL4AA6NLU0 287 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 RFPL4AL1F8VTS6 287 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 NXPH2O95156 264 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 ZNF250P15622 560 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 AADACP22760 399 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 CCKARP32238 428 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 ZNF146Q15072 292 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 PRAMEF6Q5VXH4 476 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 ZNF880Q6PDB4 577 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 POC1AQ8NBT0 407 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 RELL2Q8NC24 303 aaPredicted RBP14.35□□□□□ -0.11
DDX41-201ENST00000330503 TOMM40LQ969M1 308 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 MOB3AQ96BX8 217 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 RIMS4Q9H426 269 aaPredicted RBP14.35□□□□□ -0.11
DDX41-201ENST00000330503 JKAMPQ9P055 326 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 IGF2RP11717 2491 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 FXYD6-FXYD2A0A087WZ82 144 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 FAM25EA8MYX2 175 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 TRDCB7Z8K6 153 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 SLC33A1O00400 549 aaPredicted RBP14.35□□□□□ -0.11
DDX41-201ENST00000330503 SLC34A2O95436 690 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 OR2H2O95918 312 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 ZNF44P15621 663 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 SERPINF1P36955 418 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 RBM39Q14498 530 aaKnown RBP14.35□□□□□ -0.11
DDX41-201ENST00000330503 HERPUD1Q15011 391 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 SPERTQ8NA61 448 aa14.35□□□□□ -0.11
DDX41-201ENST00000330503 IGKV1-6A0A0C4DH72 117 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 CRYM-AS1A6NIL9 109 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 SIRPB1O00241 398 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 WNT9BO14905 357 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 CRYAAP02489 173 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 GLRXP35754 106 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 UCP3P55916 312 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 FXYD4P59646 89 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 HOXA4Q00056 320 aaPredicted RBP14.34□□□□□ -0.11
DDX41-201ENST00000330503 PDCD10Q9BUL8 212 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 ELOVL5Q9NYP7 299 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 DUSP13Q9UII6 198 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 ATP23Q9Y6H3 246 aa14.34□□□□□ -0.11
DDX41-201ENST00000330503 C1QTNF9BB2RNN3 333 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 L7N2F9 121 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 DLL1O00548 723 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 ADAP1O75689 374 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 IGHV3-13P01766 116 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 OPCMLQ14982 345 aa14.33□□□□□ -0.11
DDX41-201ENST00000330503 NDUFA5Q16718 116 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms